C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prefoldin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170627 Pfdn5-002 ENSMUSG00000001289 10090 + 15:102326189-102331349 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IH CIL_0001IH_0002 CGP 15:102296293-102331873
CIL_00060P CIL_00060P_0002 CGP 15:102326116-102338139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006457 IEA protein folding
GO:0016272 IEA prefoldin complex
GO:0051082 IEA unfolded protein binding
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243040 PFDN5-003 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000334478 PFDN5-005 protein_coding Homo_sapiens 0 305
ENST00000351500 PFDN5-004 protein_coding Homo_sapiens 0 416
ENST00000547130 PFDN5-009 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000548984 PFDN5-010 retained_intron Homo_sapiens 0 237
ENST00000549759 PFDN5-013 protein_coding Homo_sapiens 0 307
ENST00000550846 PFDN5-019 protein_coding Homo_sapiens 0 237
ENST00000550880 PFDN5-006 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000550964 PFDN5-018 retained_intron Homo_sapiens 0 311
ENST00000551018 PFDN5-001 protein_coding Homo_sapiens 0 305
ENST00000552341 PFDN5-002 retained_intron Homo_sapiens 0 311
ENST00000552548 PFDN5-020 retained_intron Homo_sapiens 0 303
ENST00000552742 PFDN5-015 nonsense_mediated_decay Homo_sapiens 0 237

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