C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prefoldin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001289 Pfdn5 10090 + 15:102326116-102331873 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001335 Pfdn5-003 102326189-102331486 nonsense_mediated_decay
  ENSMUST00000062492 Pfdn5-006 102326148-102331410 protein_coding
  ENSMUST00000165671 Pfdn5-007 102326391-102331462 protein_coding
  ENSMUST00000165717 Pfdn5-008 102326410-102331307 protein_coding
  ENSMUST00000166658 Pfdn5-001 102326116-102331873 protein_coding
  ENSMUST00000168805 Pfdn5-005 102326168-102331408 retained_intron
  ENSMUST00000169637 Pfdn5-004 102326383-102328817 protein_coding
  ENSMUST00000170627 Pfdn5-002 102326189-102331349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001335ENSMUST00000165717ENSMUST00000166658
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001335 N/A N/A N/A 111.041±0.00 N/A N/A N/A N/A N/A N/A 29.588±5.46 195.253±18.46 99.148±14.16 195.882±0.00
ENSMUST00000165717 N/A N/A 161.266±0.00 313.315±0.00 N/A N/A 59.028±0.00 N/A N/A N/A 48.070±5.47 440.631±33.29 218.263±70.39 523.347±0.00
ENSMUST00000166658 67.522±3.83 20.055±2.47 163.226±27.62 119.392±3.65 47.179±19.01 34.388±6.27 55.376±7.52 89.159±5.26 39.062±25.14 50.214±4.85 32.008±4.04 69.554±11.54 77.577±2.65 193.301±4.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IH CIL_0001IH_0002 CGP 15:102296293-102331873
CIL_00060P CIL_00060P_0002 CGP 15:102326116-102338139

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006457 IEA protein folding
GO:0016272 IEA prefoldin complex
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0051082 IEA unfolded protein binding
GO:0060041 IMP retina development in camera-type eye
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035043 pfdn5 prefoldin 5 protein_coding Danio_rerio
ENSG00000123349 PFDN5 prefoldin subunit 5 protein_coding Homo_sapiens

Loading