C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 788
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170770 Zfp788-201 ENSMUSG00000074165 10090 + 7:41647584-41650596 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000170770
Transcript ID Adrenal Bladder Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000170770 0.490±0.00 1.097±0.04 0.353±0.07 0.193±0.05 0.252±0.03 0.541±0.00 2.158±1.21 0.709±0.27 0.398±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WQ CIL_0004WQ_0006 CGP 7:41599261-41651534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269834 ZIM3-001 protein_coding Homo_sapiens 0.0000000005 71
ENST00000311331 ZNF624-001 protein_coding Homo_sapiens 0.0000005 62
ENST00000343325 ZNF791-001 protein_coding Homo_sapiens 8.40779e-45 187
ENST00000344099 ZNF14-001 protein_coding Homo_sapiens 0 339
ENST00000356555 ZNF300P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0001 53
ENST00000366503 ZNF670-001 protein_coding Homo_sapiens 6e-38 163
ENST00000446165 ZNF791-002 protein_coding Homo_sapiens 9.80909e-45 187
ENST00000520773 ZNF300P1-002 processed_transcript Homo_sapiens 0.0002 53
ENST00000579528 ZNF624-005 retained_intron Homo_sapiens 0.0000004 62

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