C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor Dp 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170909 Tfdp1-201 ENSMUSG00000038482 10090 + 8:13339674-13377702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170909 24.016±6.23 10.694±0.82 23.038±16.02 42.121±31.31 11.952±4.04 13.679±4.81 14.188±0.53 12.513±2.35 15.444±10.89 7.502±1.89 11.706±1.81 24.871±4.09 47.344±16.14 18.468±3.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TH CIL_0000TH_0002 CGP 8:13288013-13377702
CIL_00076E CIL_00076E_0002 CGP 8:13339674-13396778

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0008544 IMP epidermis development
GO:0019904 IEA protein domain specific binding
GO:0043276 IDA anoikis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:2000278 IMP regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000155619 tfdp2-001 protein_coding Danio_rerio 0 305
ENSDART00000128602 tfdp2-201 protein_coding Danio_rerio 0 298
ENSDART00000062868 tfdp2-006 protein_coding Danio_rerio 0 298
ENSDART00000156930 tfdp2-004 processed_transcript Danio_rerio 0 289
ENSDART00000155945 tfdp2-007 retained_intron Danio_rerio 0 231
ENSDART00000157273 tfdp2-003 processed_transcript Danio_rerio 0 222
ENSDART00000156852 tfdp2-002 retained_intron Danio_rerio 5e-28 130
ENST00000375370 TFDP1-001 protein_coding Homo_sapiens 0 1439
ENST00000408980 TFDP1-005 protein_coding Homo_sapiens 0 863
ENST00000453595 BX842568.2-001 processed_pseudogene Homo_sapiens 0 1288
ENST00000465174 TFDP1-003 processed_transcript Homo_sapiens 0 368
ENST00000494812 TFDP1-007 processed_transcript Homo_sapiens 0 235
ENST00000544902 TFDP1-008 nonsense_mediated_decay Homo_sapiens 0 828

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