C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: trafficking protein particle complex 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170994 Trappc12-203 ENSMUSG00000020628 10090 - 12:28709508-28750453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000170994
Transcript ID Muscle Ovary Placenta
ENSMUST00000170994 0.716±0.00 1.699±0.00 1.648±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EQ CIL_0008EQ_0002 VISTA 12:28516804-29118905
CIL_0006OI CIL_0006OI_0002 CGP 12:28675231-28750453
CIL_0001Q5 CIL_0001Q5_0002 CGP 12:28690629-28867491

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324266 TRAPPC12-002 protein_coding Homo_sapiens 0 710
ENST00000382110 TRAPPC12-001 protein_coding Homo_sapiens 0 710
ENST00000411973 TRAPPC12-005 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000417243 TRAPPC12-018 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000441983 TRAPPC12-007 protein_coding Homo_sapiens 0 532
ENST00000457845 TRAPPC12-006 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000618133 AC216281.1-201 protein_coding Homo_sapiens 0 499

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