C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 and Abl enzyme substrate 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171109 Cables1-202 ENSMUSG00000040957 10090 + 18:11839220-11945621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171109 5.043±1.47 1.900±0.95 2.756±0.26 1.217±0.26 2.532±0.93 5.328±1.92 1.025±0.44 2.154±1.03 0.334±0.17 3.200±0.52 0.587±0.09 14.938±6.56 4.194±1.59 0.470±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NS CIL_0005NS_0002 CGP 18:11633276-11945627
CIL_0004S6 CIL_0004S6_0002 CGP 18:11839220-12121480

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0007399 IMP nervous system development
GO:0016538 IEA cyclin-dependent protein serine/threonine kinase regulator activity
GO:0045859 IEA regulation of protein kinase activity
GO:0051302 IEA regulation of cell division
GO:0051726 TAS regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089207 cables1-201 protein_coding Danio_rerio 0 604
ENST00000256925 CABLES1-001 protein_coding Homo_sapiens 0 1711
ENST00000400473 CABLES1-003 protein_coding Homo_sapiens 0 1356
ENST00000420687 CABLES1-002 protein_coding Homo_sapiens 0 1358
ENST00000578052 CABLES1-006 retained_intron Homo_sapiens 0 196
ENST00000579963 CABLES1-010 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000580153 CABLES1-004 protein_coding Homo_sapiens 0 348
ENST00000580644 CABLES1-009 processed_transcript Homo_sapiens 0 274
ENST00000582882 CABLES1-008 protein_coding Homo_sapiens 0 636
ENST00000583220 CABLES1-007 processed_transcript Homo_sapiens 0 455

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