C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005NS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101773-ENSG00000134508 CGP 9606 18:22798261-23260467
GeneTranscriptPositionBiotype
ENSG00000101773 (RBBP8)
retinoblastoma binding protein 8 		ENST00000327155 (RBBP8-001) 22933315-23026486 protein_coding
ENST00000360790 (RBBP8-005) 22934750-23026370 protein_coding
ENST00000399721 (RBBP8-003) 22933876-22993569 protein_coding
ENST00000399722 (RBBP8-004) 22933826-23026488 protein_coding
ENST00000399725 (RBBP8-002) 22933841-23026486 protein_coding
ENST00000577445 (RBBP8-017) 22968842-22990944 protein_coding
ENST00000577588 (RBBP8-009) 22914123-22936940 protein_coding
ENST00000579124 (RBBP8-007) 22914121-22949658 protein_coding
ENST00000580892 (RBBP8-013) 22946339-22950035 retained_intron
ENST00000581687 (RBBP8-016) 23016796-23026488 protein_coding
ENST00000581819 (RBBP8-010) 22914139-22968810 protein_coding
ENST00000582354 (RBBP8-008) 22914123-22984897 protein_coding
ENST00000583057 (RBBP8-015) 22993484-23026467 protein_coding
ENST00000583594 (RBBP8-012) 22933881-22937118 protein_coding
ENST00000583700 (RBBP8-011) 22798261-22936883 protein_coding
ENST00000585177 (RBBP8-014) 22975181-22991026 nonsense_mediated_decay
ENSG00000134490 (TMEM241)
transmembrane protein 241 		ENST00000383233 (TMEM241-001) 23296017-23437905 protein_coding
ENST00000460322 (TMEM241-005) 23297894-23437946 nonsense_mediated_decay
ENST00000473688 (TMEM241-002) 23296017-23437961 nonsense_mediated_decay
ENST00000475185 (TMEM241-003) 23296013-23331259 processed_transcript
ENST00000477053 (TMEM241-007) 23296017-23437959 nonsense_mediated_decay
ENST00000482411 (TMEM241-006) 23352285-23437939 nonsense_mediated_decay
ENST00000497608 (TMEM241-004) 23356594-23437932 nonsense_mediated_decay
ENST00000542162 (TMEM241-201) 23298008-23437869 protein_coding
ENST00000577448 (TMEM241-009) 23297875-23331574 processed_transcript
ENST00000577531 (TMEM241-013) 23356630-23437853 nonsense_mediated_decay
ENST00000578520 (TMEM241-011) 23352255-23437955 protein_coding
ENST00000578790 (TMEM241-015) 23204387-23331215 processed_transcript
ENST00000580025 (TMEM241-008) 23371448-23437932 nonsense_mediated_decay
ENST00000581444 (TMEM241-014) 23197755-23437932 nonsense_mediated_decay
ENST00000582336 (TMEM241-012) 23365635-23437913 protein_coding
ENST00000583048 (TMEM241-010) 23297748-23370281 retained_intron
ENST00000584625 (TMEM241-016) 23197144-23227008 processed_transcript
ENSG00000134508 (CABLES1)
Cdk5 and Abl enzyme substrate 1 		ENST00000256925 (CABLES1-001) 23135763-23260467 protein_coding
ENST00000400473 (CABLES1-003) 23134564-23257747 protein_coding
ENST00000420687 (CABLES1-002) 23155825-23258653 protein_coding
ENST00000578052 (CABLES1-006) 23136549-23189357 retained_intron
ENST00000579963 (CABLES1-010) 23134564-23258654 nonsense_mediated_decay
ENST00000580153 (CABLES1-004) 23135452-23194540 protein_coding
ENST00000580644 (CABLES1-009) 23136493-23190530 processed_transcript
ENST00000582882 (CABLES1-008) 23136424-23214231 protein_coding
ENST00000583220 (CABLES1-007) 23136459-23197053 processed_transcript
ENST00000585061 (CABLES1-005) 23149709-23258139 processed_transcript
ENSG00000223023 (Y_RNA)
Y RNA 		ENST00000411091 (Y_RNA.1-824) 23024596-23024703 misc_RNA
ENSG00000242182 (RN7SL745P)
RNA, 7SL, cytoplasmic 745, pseudogene 		ENST00000484900 (RN7SL745P-201) 23004564-23004862 misc_RNA
ENSG00000265939 (UBE2CP2)
ubiquitin-conjugating enzyme E2C pseudogene 2 		ENST00000583290 (UBE2CP2-001) 22900486-22900995 processed_pseudogene
ENSG00000265943 (RP11-739L10.1)
 ENST00000578831 (RP11-739L10.1-001) 22699481-22933764 antisense
ENSG00000266495 (RP11-17J14.2)
 ENST00000585184 (RP11-17J14.2-001) 23257164-23260354 antisense
ENSG00000266850 (RP11-370A5.1)
 ENST00000579356 (RP11-370A5.1-002) 22723491-22778173 antisense
ENST00000581177 (RP11-370A5.1-004) 22723503-22731565 antisense
ENST00000581274 (RP11-370A5.1-003) 22723493-22786873 antisense
ENST00000583086 (RP11-370A5.1-001) 22784365-22907721 antisense
ENSG00000273232 (RP11-370A5.2)
 ENST00000609775 (RP11-370A5.2-001) 22882825-22883357 sense_intronic
CIL_0005NS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041238-ENSMUSG00000040957 CGP 10090 18:11633276-11945627
GeneTranscriptPositionBiotype
ENSMUSG00000040957 (Cables1)
CDK5 and Abl enzyme substrate 1 		ENSMUST00000046948 (Cables1-201) 11839274-11945627 protein_coding
ENSMUST00000171109 (Cables1-202) 11839220-11945621 protein_coding
ENSMUSG00000041238 (Rbbp8)
retinoblastoma binding protein 8 		ENSMUST00000047322 (Rbbp8-201) 11657349-11743207 protein_coding
ENSMUST00000115861 (Rbbp8-202) 11633276-11743207 protein_coding
ENSMUSG00000097440 (Gm6277)
predicted gene 6277 		ENSMUST00000180860 (Gm6277-201) 11820676-11839337 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NS_0001ENSG00000101773ENST00000327155ENST00000360790ENST00000399722ENST00000399725ENST00000581687ENST00000582354ENST00000583057ENSG00000134490ENST00000383233ENST00000473688ENST00000475185ENST00000482411ENST00000542162ENST00000577448ENST00000577531ENST00000578790ENST00000581444ENST00000583048ENST00000584625ENSG00000134508ENST00000256925ENST00000400473ENST00000420687ENST00000579963ENST00000582882ENST00000583220ENSG00000223023ENST00000411091ENSG00000242182ENST00000484900ENSG00000265939ENST00000583290ENSG00000265943ENST00000578831ENSG00000266495ENST00000585184ENSG00000266850ENST00000579356ENST00000581177ENST00000581274ENST00000583086ENSG00000273232ENST00000609775CIL_0005NS_0002ENSMUSG00000040957ENSMUST00000046948ENSMUST00000171109ENSMUSG00000041238ENSMUST00000047322ENSMUST00000115861ENSMUSG00000097440ENSMUST00000180860
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101773 ENST00000327155 0.806±0.00 0.877±0.00 1.680±0.00 0.709±0.00 1.699±0.60 1.942±0.02 0.468±0.12 5.576±0.00 0.863±0.00 2.740±1.55 N/A 2.191±0.50 1.597±0.29 2.932±0.51
ENST00000360790 1.203±0.00 1.218±0.00 N/A N/A 0.606±0.00 N/A 0.212±0.00 N/A N/A N/A N/A N/A 0.573±0.00 N/A
ENST00000399721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399722 N/A N/A 0.693±0.00 0.371±0.00 0.682±0.00 N/A 0.399±0.00 N/A N/A 0.391±0.00 N/A N/A N/A 2.340±0.00
ENST00000399725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.703±0.05 N/A N/A
ENST00000577445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.884±0.00 N/A N/A
ENST00000581819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582354 N/A N/A 2.243±0.00 N/A N/A N/A N/A N/A 1.199±0.00 1.262±0.00 N/A 2.570±0.00 2.937±0.00 10.199±0.00
ENST00000583057 1.177±0.00 2.179±0.00 2.044±0.00 0.395±0.00 1.198±0.00 1.247±0.15 N/A 3.620±3.32 0.917±0.00 2.054±0.00 N/A 3.440±1.80 5.166±0.00 11.903±4.95
ENST00000583594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134490 ENST00000383233 N/A 0.567±0.00 N/A 0.500±0.00 0.982±0.00 N/A 0.440±0.00 0.432±0.00 0.256±0.00 0.686±0.42 N/A 0.601±0.05 0.739±0.20 0.282±0.00
ENST00000460322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473688 1.041±0.00 N/A N/A 0.951±0.00 0.601±0.00 1.150±0.00 0.046±0.00 0.386±0.00 0.217±0.00 0.109±0.00 N/A 0.507±0.00 0.230±0.00 N/A
ENST00000475185 N/A 1.088±0.00 N/A 0.862±0.00 0.511±0.40 N/A 0.149±0.00 N/A 0.261±0.00 0.714±0.00 N/A 1.096±0.85 0.959±0.00 N/A
ENST00000477053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482411 N/A N/A N/A 3.379±0.00 N/A N/A 0.090±0.00 N/A N/A N/A N/A 1.792±0.00 N/A N/A
ENST00000497608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542162 N/A N/A N/A N/A N/A 0.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577448 N/A N/A N/A N/A N/A N/A N/A N/A 2.329±0.00 N/A N/A 6.551±0.00 2.793±0.00 N/A
ENST00000577531 N/A N/A N/A N/A N/A N/A N/A N/A 3.138±0.00 N/A 1.711±1.29 N/A N/A N/A
ENST00000578520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578790 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A
ENST00000580025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581444 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.426±0.00 N/A N/A N/A N/A
ENST00000582336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583048 N/A N/A N/A 4.171±0.00 0.481±0.00 N/A N/A N/A N/A N/A N/A 3.455±0.00 3.804±0.00 3.760±0.00
ENST00000584625 N/A N/A N/A N/A 0.458±0.00 N/A N/A N/A 0.855±0.00 0.904±0.00 N/A N/A N/A N/A
ENSG00000134508 ENST00000256925 4.141±0.00 1.190±0.00 N/A 13.583±0.00 8.677±0.00 N/A 0.196±0.00 2.736±1.78 N/A 1.744±0.53 0.150±0.00 2.196±0.49 1.376±0.52 1.261±0.90
ENST00000400473 N/A N/A N/A N/A 1.849±0.00 N/A 0.257±0.17 N/A 1.092±0.00 0.858±0.00 N/A 3.272±2.03 3.683±0.00 1.223±0.00
ENST00000420687 5.434±0.00 1.024±0.00 2.045±0.00 3.072±0.00 3.807±0.00 0.913±0.39 N/A 1.190±0.00 3.362±0.00 1.817±0.87 0.082±0.00 2.075±0.53 1.107±0.23 1.642±0.75
ENST00000578052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579963 N/A N/A N/A N/A N/A N/A N/A 2.024±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A
ENST00000583220 N/A N/A N/A N/A N/A 2.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223023 ENST00000411091 N/A 0.323±0.00 N/A 0.636±0.00 0.919±0.00 N/A N/A 0.613±0.00 0.276±0.00 N/A N/A N/A N/A 0.727±0.00
ENSG00000242182 ENST00000484900 N/A 0.157±0.00 0.372±0.00 0.055±0.00 N/A N/A N/A 0.422±0.00 N/A 1.270±1.22 N/A N/A 0.121±0.00 0.156±0.04
ENSG00000265939 ENST00000583290 N/A N/A 0.343±0.00 N/A 0.463±0.00 0.480±0.00 N/A N/A N/A N/A N/A 0.869±0.00 0.099±0.00 0.132±0.04
ENSG00000265943 ENST00000578831 N/A 0.180±0.00 0.465±0.00 0.027±0.00 0.050±0.00 0.118±0.00 N/A 0.151±0.00 0.609±0.00 0.084±0.00 N/A 0.105±0.04 0.094±0.01 0.450±0.00
ENSG00000266495 ENST00000585184 N/A N/A N/A N/A N/A 4.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266850 ENST00000579356 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A
ENST00000581177 N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A N/A N/A 0.051±0.00
ENST00000581274 N/A 0.229±0.00 N/A N/A 0.095±0.00 N/A N/A 0.292±0.00 1.735±0.00 N/A N/A 0.177±0.08 N/A 0.356±0.21
ENST00000583086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A
ENSG00000273232 ENST00000609775 0.033±0.00 N/A N/A N/A 0.280±0.04 N/A N/A N/A N/A N/A N/A 0.217±0.13 0.129±0.00 0.853±0.52
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040957 ENSMUST00000046948 4.437±0.98 8.238±3.32 0.889±0.01 2.935±0.68 5.909±1.09 15.566±1.50 1.242±0.59 3.207±0.86 0.360±0.20 3.061±1.03 0.254±0.03 32.206±13.91 0.882±0.26 0.331±0.00
ENSMUST00000171109 5.043±1.47 1.900±0.95 2.756±0.26 1.217±0.26 2.532±0.93 5.328±1.92 1.025±0.44 2.154±1.03 0.334±0.17 3.200±0.52 0.587±0.09 14.938±6.56 4.194±1.59 0.470±0.20
ENSMUSG00000041238 ENSMUST00000047322 1.801±0.54 0.855±0.31 1.354±0.65 2.034±0.69 1.045±0.46 1.031±0.33 0.393±0.04 1.177±0.29 1.928±1.67 1.052±0.14 0.287±0.07 1.944±2.28 8.232±4.44 4.356±0.77
ENSMUST00000115861 N/A N/A 1.751±0.24 N/A 0.564±0.22 N/A N/A 0.435±0.15 N/A 0.232±0.00 N/A 1.215±0.74 N/A N/A
ENSMUSG00000097440 ENSMUST00000180860 N/A N/A N/A 0.703±0.00 2.720±0.00 N/A N/A N/A N/A N/A 0.117±0.02 N/A N/A N/A

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