C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: avian erythroblastosis virus E-26 (v-ets) oncogene related
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171646 Erg-006 ENSMUSG00000040732 10090 - 16:95360645-95524603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171646
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171646 4.033±0.66 0.874±0.21 0.306±0.00 1.595±0.17 0.294±0.00 1.109±0.00 1.044±0.19 0.568±0.00 4.302±0.00 1.369±0.31 1.102±0.33 1.262±0.96 0.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GJ CIL_0003GJ_0002 CGP 16:95257558-95586593
CIL_0003GI CIL_0003GI_0002 CGP 16:95359169-95721051

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102789 fli1b-201 protein_coding Danio_rerio 0 261
ENSDART00000058613 fli1b-001 protein_coding Danio_rerio 0 261
ENSDART00000134010 fli1b-002 protein_coding Danio_rerio 0 261
ENSDART00000124717 fli1b-202 protein_coding Danio_rerio 0 255
ENSDART00000013057 fev-003 processed_transcript Danio_rerio 0 206
ENSDART00000128629 fev-001 protein_coding Danio_rerio 0 206
ENSDART00000093343 fev-002 protein_coding Danio_rerio 0 206
ENST00000288319 ERG-001 protein_coding Homo_sapiens 0 881
ENST00000398897 ERG-004 protein_coding Homo_sapiens 0 881
ENST00000398905 ERG-005 protein_coding Homo_sapiens 0 881
ENST00000398907 ERG-009 protein_coding Homo_sapiens 0 883
ENST00000398910 ERG-008 protein_coding Homo_sapiens 0 883
ENST00000398911 ERG-007 protein_coding Homo_sapiens 0 881
ENST00000398919 ERG-013 protein_coding Homo_sapiens 0 872
ENST00000417133 ERG-002 protein_coding Homo_sapiens 0 881
ENST00000429727 ERG-201 protein_coding Homo_sapiens 0 872
ENST00000442448 ERG-202 protein_coding Homo_sapiens 0 881
ENST00000453032 ERG-014 protein_coding Homo_sapiens 0 881
ENST00000468474 ERG-003 retained_intron Homo_sapiens 0 872
ENST00000473107 ERG-010 processed_transcript Homo_sapiens 0 556
ENST00000481609 ERG-011 processed_transcript Homo_sapiens 0 800
ENST00000492833 ERG-012 processed_transcript Homo_sapiens 0 800

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