C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-ets avian erythroblastosis virus E26 oncogene homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000288319 ERG-001 ENSG00000157554 9606 - 21:38380027-38498483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000288319
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000288319 1.114±0.00 0.134±0.00 0.652±0.00 0.812±0.34 0.746±0.00 0.459±0.00 2.263±0.00 0.362±0.00 0.632±0.00 2.650±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GJ CIL_0003GJ_0001 CGP 21:38157034-38661780
CIL_0003GI CIL_0003GI_0001 CGP 21:38380027-38824955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 TAS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 TAS signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IBA:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0006468 TAS protein phosphorylation
GO:0007165 TAS signal transduction
GO:0007275 TAS multicellular organismal development
GO:0008283 TAS cell proliferation
GO:0030154 IBA cell differentiation
GO:0030529 IDA ribonucleoprotein complex
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122199 Erg-009 protein_coding Mus_musculus 0 2174
ENSMUST00000113846 Erg-001 protein_coding Mus_musculus 0 2017
ENSMUST00000176345 Erg-007 protein_coding Mus_musculus 0 1557
ENSMUST00000118113 Erg-003 protein_coding Mus_musculus 0 1062
ENSMUST00000077773 Erg-002 protein_coding Mus_musculus 0 1040
ENSMUST00000113848 Erg-004 protein_coding Mus_musculus 0 955
ENSMUST00000177450 Erg-008 protein_coding Mus_musculus 0 911
ENSMUST00000121809 Erg-005 protein_coding Mus_musculus 0 911
ENSMUST00000171646 Erg-006 protein_coding Mus_musculus 0 881
ENSDART00000076861 fli1a-001 protein_coding Danio_rerio 0 453
ENSDART00000108780 erg-201 protein_coding Danio_rerio 0 383

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