C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171805 Smarca5-ps-002 ENSMUSG00000052912 10090 + 4:145464204-145465487 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171805 0.163±0.00 0.307±0.11 0.027±0.00 0.035±0.00 0.058±0.02 0.255±0.22 0.034±0.00 0.038±0.00 0.016±0.01 0.060±0.00 0.036±0.00 0.201±0.08 0.151±0.05 0.338±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283131 SMARCA5-001 protein_coding Homo_sapiens 0 1463

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