C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, ZZ-type with EF hand domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172220 Zzef1-201 ENSMUSG00000055670 10090 + 11:72796226-72927120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172220 2.789±0.61 3.301±0.49 2.381±0.17 4.643±0.87 2.111±1.00 6.006±2.47 1.376±0.07 1.648±1.02 2.019±0.65 3.288±0.79 1.151±0.42 2.969±1.59 5.275±2.57 1.986±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003I3 CIL_0003I3_0002 CGP 11:72777232-72927120
CIL_0003KA CIL_0003KA_0002 CGP 11:72796226-72993044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381638 ZZEF1-001 protein_coding Homo_sapiens 0 7515
ENST00000570365 ZZEF1-008 retained_intron Homo_sapiens 0 353
ENST00000571436 ZZEF1-004 nonsense_mediated_decay Homo_sapiens 0 1262
ENST00000572426 ZZEF1-003 retained_intron Homo_sapiens 0 2987
ENST00000572699 ZZEF1-007 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000572831 ZZEF1-011 nonsense_mediated_decay Homo_sapiens 5.99756e-43 178
ENST00000573183 ZZEF1-005 protein_coding Homo_sapiens 0 1919
ENST00000573536 ZZEF1-006 retained_intron Homo_sapiens 0 920
ENST00000573606 ZZEF1-009 retained_intron Homo_sapiens 0 712
ENST00000574474 ZZEF1-002 processed_transcript Homo_sapiens 0 3851
ENST00000575428 ZZEF1-010 retained_intron Homo_sapiens 0 449

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