C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000094380-ENSDARG00000060978 CGP 7955 5:32676069-32906785
GeneTranscriptPositionBiotype
ENSDARG00000060978 (atp2a3)
ATPase, Ca++ transporting, ubiquitous 		ENSDART00000086443 (atp2a3-201) 32863753-32904105 protein_coding
ENSDART00000133432 (atp2a3-001) 32851956-32906785 protein_coding
ENSDARG00000094380 (zzef1)
zinc finger, ZZ-type with EF hand domain 1 		ENSDART00000141463 (zzef1-001) 32676069-32699600 protein_coding
ENSDART00000146476 (zzef1-002) 32702998-32712727 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003KA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055670-ENSMUSG00000020788 CGP 10090 11:72796226-72993044
GeneTranscriptPositionBiotype
ENSMUSG00000020788 (Atp2a3)
ATPase, Ca++ transporting, ubiquitous 		ENSMUST00000021142 (Atp2a3-201) 72961169-72993043 protein_coding
ENSMUST00000108484 (Atp2a3-002) 72961169-72993044 protein_coding
ENSMUST00000108485 (Atp2a3-202) 72961169-72993043 protein_coding
ENSMUST00000108486 (Atp2a3-001) 72961169-72993044 protein_coding
ENSMUST00000135234 (Atp2a3-004) 72982097-72983545 processed_transcript
ENSMUST00000149493 (Atp2a3-003) 72961290-72970760 retained_intron
ENSMUST00000163326 (Atp2a3-203) 72961169-72993043 protein_coding
ENSMUSG00000055670 (Zzef1)
zinc finger, ZZ-type with EF hand domain 1 		ENSMUST00000069395 (Zzef1-001) 72796254-72927118 protein_coding
ENSMUST00000125122 (Zzef1-005) 72920843-72927120 retained_intron
ENSMUST00000145393 (Zzef1-004) 72842994-72850745 processed_transcript
ENSMUST00000150551 (Zzef1-006) 72796226-72851380 retained_intron
ENSMUST00000152063 (Zzef1-003) 72914943-72918896 retained_intron
ENSMUST00000152481 (Zzef1-002) 72912296-72925810 retained_intron
ENSMUST00000172220 (Zzef1-201) 72796226-72927120 protein_coding
ENSMUSG00000065298 (Gm26121)
predicted gene, 26121 		ENSMUST00000083364 (Gm26121-201) 72881792-72881953 snRNA
ENSMUSG00000084329 (Gm6733)
predicted gene 6733 		ENSMUST00000118302 (Gm6733-001) 72833461-72835380 processed_pseudogene
ENSMUSG00000089224 (Gm22075)
predicted gene, 22075 		ENSMUST00000158599 (Gm22075-201) 72800287-72800478 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KA_0001ENSDARG00000060978ENSDART00000086443ENSDART00000133432ENSDARG00000094380ENSDART00000141463ENSDART00000146476CIL_0003KA_0002ENSMUSG00000020788ENSMUST00000021142ENSMUST00000108484ENSMUST00000108485ENSMUST00000108486ENSMUST00000135234ENSMUST00000149493ENSMUST00000163326ENSMUSG00000055670ENSMUST00000069395ENSMUST00000125122ENSMUST00000145393ENSMUST00000150551ENSMUST00000152063ENSMUST00000152481ENSMUST00000172220ENSMUSG00000065298ENSMUST00000083364ENSMUSG00000084329ENSMUST00000118302ENSMUSG00000089224ENSMUST00000158599
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KA_0001ENSDARG00000060978ENSDART00000086443ENSDART00000133432ENSDARG00000094380ENSDART00000141463ENSDART00000146476CIL_0003KA_0002ENSMUSG00000020788ENSMUST00000021142ENSMUST00000108484ENSMUST00000108485ENSMUST00000108486ENSMUST00000163326ENSMUSG00000055670ENSMUST00000069395ENSMUST00000125122ENSMUST00000150551ENSMUST00000152481ENSMUST00000172220ENSMUSG00000065298ENSMUST00000083364ENSMUSG00000084329ENSMUST00000118302ENSMUSG00000089224ENSMUST00000158599
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060978 ENSDART00000086443 N/A N/A N/A N/A N/A N/A N/A N/A 0.482±0.00 N/A N/A N/A N/A N/A
ENSDART00000133432 N/A N/A N/A 53.264±10.35 N/A N/A 2.588±0.94 6.179±0.54 0.979±0.00 N/A 5.135±0.00 N/A N/A N/A
ENSDARG00000094380 ENSDART00000141463 N/A N/A N/A 0.593±0.72 N/A N/A 0.454±0.00 0.971±0.00 0.465±0.00 N/A 0.534±0.00 N/A N/A N/A
ENSDART00000146476 N/A N/A N/A 3.516±1.41 N/A N/A 2.376±0.73 3.603±0.00 1.740±0.00 N/A 1.504±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020788 ENSMUST00000021142 21.652±3.87 4.381±0.92 10.870±2.88 0.860±0.62 21.376±9.80 246.939±26.02 4.163±1.63 9.653±0.77 3.048±2.40 106.412±9.56 1.580±0.60 8.384±4.25 5.018±3.69 0.681±0.29
ENSMUST00000108484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.207±0.00 N/A N/A
ENSMUST00000108485 N/A N/A N/A 0.395±0.25 8.937±3.22 98.942±23.05 N/A 1.810±0.00 1.593±0.72 N/A 0.744±0.27 2.054±0.92 3.205±1.48 0.430±0.19
ENSMUST00000108486 N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.00 N/A N/A 1.062±0.00 N/A N/A
ENSMUST00000135234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163326 4.869±0.00 1.991±0.27 1.679±0.00 N/A N/A N/A N/A N/A 0.746±0.09 N/A N/A 2.700±1.06 3.461±2.00 N/A
ENSMUSG00000055670 ENSMUST00000069395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.762±0.00 N/A
ENSMUST00000125122 3.640±1.21 3.673±0.64 3.619±0.74 6.500±2.05 3.125±0.77 9.245±1.94 1.101±0.00 3.243±0.74 2.185±0.59 5.708±0.22 0.900±0.24 3.250±0.09 3.968±0.35 1.406±0.00
ENSMUST00000145393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150551 N/A 5.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152481 N/A 5.793±1.13 N/A N/A 6.613±0.78 8.344±1.35 N/A 2.831±0.03 2.300±0.70 4.234±0.00 N/A N/A N/A N/A
ENSMUST00000172220 2.789±0.61 3.301±0.49 2.381±0.17 4.643±0.87 2.111±1.00 6.006±2.47 1.376±0.07 1.648±1.02 2.019±0.65 3.288±0.79 1.151±0.42 2.969±1.59 5.275±2.57 1.986±0.43
ENSMUSG00000065298 ENSMUST00000083364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.212±0.00 2.180±1.56 N/A
ENSMUSG00000084329 ENSMUST00000118302 0.368±0.06 0.218±0.11 0.249±0.12 0.220±0.08 0.502±0.18 0.256±0.08 0.180±0.05 0.202±0.08 0.140±0.08 0.497±0.09 0.035±0.03 0.457±0.30 0.121±0.06 0.189±0.05
ENSMUSG00000089224 ENSMUST00000158599 N/A N/A N/A 1.375±0.00 N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 0.175±0.00 N/A

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