C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 6, regulatory subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172362 Ppp6r3-203 ENSMUSG00000024908 10090 - 19:3454933-3575749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172362
Transcript ID Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172362 23.523±11.55 3.161±1.32 4.642±0.30 12.926±0.00 4.175±1.12 5.368±1.08 1.839±0.26 9.664±5.68 2.730±0.40 1.496±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P1 CIL_0001P1_0002 CGP 19:3454933-3686564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0019903 ISA protein phosphatase binding
GO:0043666 ISA regulation of phosphoprotein phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265636 PPP6R3-003 protein_coding Homo_sapiens 0 1847
ENST00000265637 PPP6R3-021 protein_coding Homo_sapiens 0 4093
ENST00000393800 PPP6R3-001 protein_coding Homo_sapiens 0 2159
ENST00000393801 PPP6R3-005 protein_coding Homo_sapiens 0 2159
ENST00000524845 PPP6R3-026 protein_coding Homo_sapiens 0 2159
ENST00000524904 PPP6R3-007 protein_coding Homo_sapiens 0 2159
ENST00000525050 PPP6R3-015 retained_intron Homo_sapiens 0 579
ENST00000525152 PPP6R3-024 retained_intron Homo_sapiens 0 405
ENST00000525421 PPP6R3-022 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000526307 PPP6R3-006 retained_intron Homo_sapiens 0 1770
ENST00000526574 PPP6R3-019 retained_intron Homo_sapiens 0 455
ENST00000526593 PPP6R3-023 nonsense_mediated_decay Homo_sapiens 1e-34 150
ENST00000527069 PPP6R3-014 retained_intron Homo_sapiens 0 483
ENST00000527403 PPP6R3-020 protein_coding Homo_sapiens 0 2159
ENST00000528635 PPP6R3-012 protein_coding Homo_sapiens 3e-25 119
ENST00000529172 PPP6R3-016 retained_intron Homo_sapiens 0 697
ENST00000529344 PPP6R3-011 protein_coding Homo_sapiens 0 346
ENST00000529710 PPP6R3-004 protein_coding Homo_sapiens 0 1443
ENST00000529907 PPP6R3-009 protein_coding Homo_sapiens 0 702
ENST00000530427 PPP6R3-010 processed_transcript Homo_sapiens 4e-29 132
ENST00000530734 PPP6R3-025 protein_coding Homo_sapiens 0 481
ENST00000531244 PPP6R3-013 protein_coding Homo_sapiens 0 830
ENST00000533127 PPP6R3-027 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000534190 PPP6R3-018 protein_coding Homo_sapiens 0 1299
ENST00000534534 PPP6R3-008 protein_coding Homo_sapiens 0 1818

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