C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuro-oncological ventral antigen 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172835 Nova2-001 ENSMUSG00000030411 10090 + 7:18925888-18962057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172835
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172835 1.173±0.28 1.397±0.24 0.502±0.06 11.495±6.69 0.722±0.20 0.720±0.18 0.688±0.15 0.541±0.06 0.136±0.03 2.921±0.22 0.388±0.10 0.956±0.28 0.342±0.25 1.634±0.93

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IDA RNA binding
GO:0051252 IGI regulation of RNA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263257 NOVA2-001 protein_coding Homo_sapiens 0 2713
ENST00000344429 NOVA1-001 protein_coding Homo_sapiens 6e-30 135
ENST00000347476 NOVA1-012 protein_coding Homo_sapiens 0.000000000007 75
ENST00000449198 NOVA1-007 protein_coding Homo_sapiens 5e-26 122
ENST00000465357 NOVA1-002 protein_coding Homo_sapiens 0 241
ENST00000483536 NOVA1-004 nonsense_mediated_decay Homo_sapiens 9e-21 108
ENST00000539517 NOVA1-003 protein_coding Homo_sapiens 2e-29 135
ENST00000546546 NOVA1-011 nonsense_mediated_decay Homo_sapiens 0.0000000001 71
ENST00000547415 NOVA1-009 retained_intron Homo_sapiens 0.00000000009 71
ENST00000547619 NOVA1-010 protein_coding Homo_sapiens 6e-30 135
ENST00000549146 NOVA1-008 protein_coding Homo_sapiens 3e-26 122
ENST00000549571 NOVA1-006 protein_coding Homo_sapiens 1e-26 124
ENST00000551754 NOVA1-005 processed_transcript Homo_sapiens 0.00000000008 71
ENST00000574031 NOVA1-013 protein_coding Homo_sapiens 9e-30 135
ENST00000596784 NOVA2-003 protein_coding Homo_sapiens 0 532
ENST00000599462 NOVA2-002 processed_transcript Homo_sapiens 0.00000000000005 82

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