C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAXIP1 associated glutamate rich protein 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172958 Pagr1b-001 ENSMUSG00000092534 10090 - 7:127001480-127016484 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WR CIL_0004WR_0002 CGP 7:127001480-127020327

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320330 PAGR1-002 protein_coding Homo_sapiens 0 363
ENST00000357402 MVP-001 protein_coding Homo_sapiens 0 429
ENST00000395353 MVP-201 protein_coding Homo_sapiens 0 429
ENST00000562285 PAGR1-001 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000562463 MVP-015 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000563096 MVP-014 retained_intron Homo_sapiens 0 207
ENST00000563558 MVP-018 protein_coding Homo_sapiens 0 429
ENST00000563915 MVP-002 protein_coding Homo_sapiens 0 429
ENST00000565164 MVP-009 protein_coding Homo_sapiens 0 207
ENST00000565830 MVP-013 processed_transcript Homo_sapiens 0 429
ENST00000566066 MVP-011 protein_coding Homo_sapiens 0 370
ENST00000566252 MVP-016 protein_coding Homo_sapiens 0 429
ENST00000566554 MVP-021 processed_transcript Homo_sapiens 0 233
ENST00000566859 MVP-008 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000570234 MVP-010 protein_coding Homo_sapiens 0 429
ENST00000609618 PAGR1-002 protein_coding Homo_sapiens 0 363

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