C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major vault protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357402 MVP-001 ENSG00000013364 9606 + 16:29820408-29848039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357402 89.400±0.00 62.169±0.00 9.592±0.00 23.015±0.00 40.335±17.32 55.659±9.48 10.735±8.95 35.595±33.76 11.735±4.02 46.920±28.79 25.412±0.00 69.840±54.16 51.268±11.93 58.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WR CIL_0004WR_0001 CGP 16:29815964-29830627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005643 IEA nuclear pore
GO:0005737 IDA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0019901 IPI protein kinase binding
GO:0019903 IDA protein phosphatase binding
GO:0023057 IDA negative regulation of signaling
GO:0030529 IEA ribonucleoprotein complex
GO:0031953 IDA negative regulation of protein autophosphorylation
GO:0038127 IDA ERBB signaling pathway
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051028 IEA mRNA transport
GO:0061099 IDA negative regulation of protein tyrosine kinase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165096 Mvp-001 protein_coding Mus_musculus 0 2887
ENSMUST00000133172 Mvp-002 protein_coding Mus_musculus 0 507
ENSMUST00000172958 Pagr1b-001 nonsense_mediated_decay Mus_musculus 0 429
ENSMUST00000162069 Pagr1b-002 nonsense_mediated_decay Mus_musculus 0 425

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