C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PAXIP1 associated glutamate-rich protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609618 PAGR1-002 ENSG00000263136 9606 + 16:29816511-29820117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryTestisENST00000609618
Transcript ID Kidney Ovary Testis
ENST00000609618 3.774±0.00 57.990±0.00 45.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WR CIL_0004WR_0001 CGP 16:29815964-29830627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0035097 IDA histone methyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032918 Pagr1a-001 protein_coding Mus_musculus 0 808
ENSMUST00000162069 Pagr1b-002 nonsense_mediated_decay Mus_musculus 0 363
ENSMUST00000172958 Pagr1b-001 nonsense_mediated_decay Mus_musculus 0 363
ENSMUST00000161728 Prrt2-009 processed_transcript Mus_musculus 4e-32 143

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