C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired-like homeodomain transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172971 Pitx3-002 ENSMUSG00000025229 10090 - 19:46137032-46140983 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungTestisENSMUST00000172971
Transcript ID Heart Lung Testis
ENSMUST00000172971 0.383±0.00 0.543±0.00 0.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WH CIL_0005WH_0002 CGP 19:46131897-46148326
CIL_0005WI CIL_0005WI_0002 CGP 19:46135685-46286510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0007626 IMP locomotory behavior
GO:0010468 IDA regulation of gene expression
GO:0030901 IMP midbrain development
GO:0048666 IMP neuron development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000062803 pitx1-201 protein_coding Danio_rerio 1e-36 156
ENST00000370002 PITX3-001 protein_coding Homo_sapiens 0 326
ENST00000539804 PITX3-201 protein_coding Homo_sapiens 0 315

Loading