C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired-like homeodomain transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172980 Pitx3-003 ENSMUSG00000025229 10090 - 19:46136495-46137289 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverTestisENSMUST00000172980
Transcript ID Bladder Brain Colon Liver Testis
ENSMUST00000172980 0.060±0.00 0.390±0.00 0.162±0.10 0.168±0.00 0.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WH CIL_0005WH_0002 CGP 19:46131897-46148326
CIL_0005WI CIL_0005WI_0002 CGP 19:46135685-46286510

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000062803 pitx1-201 protein_coding Danio_rerio 0 267
ENST00000370002 PITX3-001 protein_coding Homo_sapiens 0 422
ENST00000539804 PITX3-201 protein_coding Homo_sapiens 0 422

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