C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20530
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174261 Gm20530-001 ENSMUSG00000092304 10090 + 17:36094181-36094763 unprocessed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383210 VPS52-001 protein_coding Homo_sapiens 4e-36 158
ENST00000428608 VPS52-001 protein_coding Homo_sapiens 4e-36 158
ENST00000441058 VPS52-001 protein_coding Homo_sapiens 4e-36 158
ENST00000443860 VPS52-001 protein_coding Homo_sapiens 4e-36 158
ENST00000445902 VPS52-001 protein_coding Homo_sapiens 4e-36 158
ENST00000448042 VPS52-001 protein_coding Homo_sapiens 4e-36 158
ENST00000461476 VPS52-007 nonsense_mediated_decay Homo_sapiens 4e-36 158
ENST00000461743 VPS52-009 retained_intron Homo_sapiens 9e-36 154
ENST00000463476 VPS52-011 processed_transcript Homo_sapiens 1e-36 158
ENST00000466566 VPS52-009 retained_intron Homo_sapiens 9e-36 154
ENST00000467430 VPS52-006 processed_transcript Homo_sapiens 2e-31 139
ENST00000470823 VPS52-006 processed_transcript Homo_sapiens 2e-31 139
ENST00000471309 VPS52-006 processed_transcript Homo_sapiens 2e-31 139
ENST00000471761 VPS52-002 processed_transcript Homo_sapiens 3e-36 158
ENST00000471922 VPS52-011 processed_transcript Homo_sapiens 1e-36 158
ENST00000473365 VPS52-011 processed_transcript Homo_sapiens 1e-36 158
ENST00000474439 VPS52-009 retained_intron Homo_sapiens 9e-36 154
ENST00000475520 VPS52-011 processed_transcript Homo_sapiens 1e-36 158
ENST00000475583 VPS52-009 retained_intron Homo_sapiens 9e-36 154
ENST00000475984 VPS52-006 processed_transcript Homo_sapiens 2e-31 139
ENST00000476725 VPS52-007 nonsense_mediated_decay Homo_sapiens 4e-36 158
ENST00000478392 VPS52-007 nonsense_mediated_decay Homo_sapiens 4e-36 158
ENST00000478934 VPS52-002 processed_transcript Homo_sapiens 3e-36 158
ENST00000482399 VPS52-007 protein_coding Homo_sapiens 4e-36 158
ENST00000483351 VPS52-002 processed_transcript Homo_sapiens 3e-36 158
ENST00000484649 VPS52-002 processed_transcript Homo_sapiens 3e-36 158
ENST00000485137 VPS52-006 processed_transcript Homo_sapiens 2e-31 139
ENST00000488248 VPS52-009 retained_intron Homo_sapiens 9e-36 154
ENST00000488583 VPS52-002 processed_transcript Homo_sapiens 3e-36 158
ENST00000489236 VPS52-002 processed_transcript Homo_sapiens 3e-36 158
ENST00000489636 VPS52-007 retained_intron Homo_sapiens 4e-36 158
ENST00000493674 VPS52-011 processed_transcript Homo_sapiens 1e-36 158
ENST00000494451 VPS52-011 processed_transcript Homo_sapiens 1e-36 158
ENST00000494723 VPS52-006 processed_transcript Homo_sapiens 2e-31 139
ENST00000497047 VPS52-009 retained_intron Homo_sapiens 9e-36 154
ENST00000497240 VPS52-007 nonsense_mediated_decay Homo_sapiens 4e-36 158

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