C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | vacuolar protein sorting 52 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000383210  |
VPS52-001 |
ENSG00000206286 |
9606 | - |
CHR_HSCHR6_MHC_QBL_CTG1:33179079-33200718  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005768 | IEA | endosome |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0015031 | IEA | protein transport |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000025178
|
Vps52-001 | protein_coding | Mus_musculus | 0 | 2726 |
|
ENSMUST00000173196
|
Vps52-007 | protein_coding | Mus_musculus | 0 | 1829 |
|
ENSMUST00000174588
|
Vps52-006 | retained_intron | Mus_musculus | 0 | 1013 |
|
ENSMUST00000173318
|
Vps52-005 | retained_intron | Mus_musculus | 0 | 671 |
|
ENSMUST00000173445
|
Vps52-003 | retained_intron | Mus_musculus | 0 | 562 |
|
ENSMUST00000172558
|
Vps52-004 | retained_intron | Mus_musculus | 0 | 464 |
|
ENSMUST00000174447
|
Gm18733-001 | transcribed_unprocessed_pseudogene | Mus_musculus | 0 | 353 |
|
ENSMUST00000172937
|
Gm18734-001 | unprocessed_pseudogene | Mus_musculus | 0 | 219 |
|
ENSMUST00000174261
|
Gm20530-001 | unprocessed_pseudogene | Mus_musculus | 4e-36 | 158 |
