C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: placental specific protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174390 Plac1-003 ENSMUSG00000061082 10090 - X:53070172-53209724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000174390
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000174390 0.103±0.04 0.020±0.00 0.088±0.03 0.136±0.02 0.051±0.02 0.111±0.05 0.033±0.00 0.267±0.20 0.038±0.00 0.062±0.00 0.696±0.47 1.935±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JX CIL_0000JX_0002 CGP X:52988137-53240111
CIL_0000JY CIL_0000JY_0002 CGP X:53069995-53269805

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001890 IEP placenta development
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IDA extracellular region
GO:0090214 IMP spongiotrophoblast layer developmental growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359237 PLAC1-001 protein_coding Homo_sapiens 0 324
ENST00000466797 PLAC1-003 processed_transcript Homo_sapiens 8e-23 111
ENST00000473897 PLAC1-004 processed_transcript Homo_sapiens 7.00649e-45 183
ENST00000476971 PLAC1-002 processed_transcript Homo_sapiens 0 322

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