C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165704-ENSG00000170965 CGP 9606 X:134460153-134764322
GeneTranscriptPositionBiotype
ENSG00000165704 (HPRT1)
hypoxanthine phosphoribosyltransferase 1 		ENST00000298556 (HPRT1-001) 134460153-134500668 protein_coding
ENST00000462974 (HPRT1-002) 134460351-134498641 processed_transcript
ENST00000475720 (HPRT1-003) 134473374-134520513 processed_transcript
ENSG00000170965 (PLAC1)
placenta-specific 1 		ENST00000359237 (PLAC1-001) 134565838-134658483 protein_coding
ENST00000466797 (PLAC1-003) 134601557-134764322 processed_transcript
ENST00000473897 (PLAC1-004) 134566510-134764263 processed_transcript
ENST00000476971 (PLAC1-002) 134565877-134733636 processed_transcript
ENSG00000207755 (MIR450A2)
microRNA 450a-2 		ENST00000385022 (MIR450A2-201) 134540495-134540605 miRNA
ENSG00000223749 (MIR503HG)
MIR503 host gene (non-protein coding) 		ENST00000414769 (MIR503HG-004) 134543443-134546630 lincRNA
ENST00000440570 (MIR503HG-002) 134543337-134546632 lincRNA
ENST00000441492 (MIR503HG-001) 134544426-134546623 lincRNA
ENST00000445415 (MIR503HG-005) 134543767-134544880 lincRNA
ENST00000457876 (MIR503HG-003) 134544426-134545738 lincRNA
ENSG00000226107 (AC004383.3)
 ENST00000438135 (AC004383.3-001) 134522702-134522990 processed_pseudogene
ENSG00000227060 (LINC00629)
long intergenic non-protein coding RNA 629 		ENST00000434384 (LINC00629-001) 134549973-134559923 lincRNA
ENST00000592070 (LINC00629-002) 134550024-134559909 lincRNA
ENSG00000235813 (RP11-308B5.2)
 ENST00000440614 (RP11-308B5.2-001) 134599457-134606254 lincRNA
ENSG00000236509 (RPL21P133)
ribosomal protein L21 pseudogene 133 		ENST00000443666 (RPL21P133-001) 134607157-134607632 processed_pseudogene
ENSG00000237432 (RPS7P12)
ribosomal protein S7 pseudogene 12 		ENST00000422385 (RPS7P12-001) 134650830-134651411 processed_pseudogene
CIL_0000JX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025630-ENSMUSG00000061082 CGP 10090 X:52988137-53240111
GeneTranscriptPositionBiotype
ENSMUSG00000025630 (Hprt)
hypoxanthine guanine phosphoribosyl transferase 		ENSMUST00000026723 (Hprt-001) 52988137-53021659 protein_coding
ENSMUSG00000061082 (Plac1)
placental specific protein 1 		ENSMUST00000074861 (Plac1-002) 53069995-53240111 protein_coding
ENSMUST00000114843 (Plac1-001) 53069996-53114530 protein_coding
ENSMUST00000174390 (Plac1-003) 53070172-53209724 protein_coding
ENSMUSG00000065503 (Mir351)
microRNA 351 		ENSMUST00000083569 (Mir351-201) 53053255-53053353 miRNA
ENSMUSG00000076122 (Mir503)
microRNA 503 		ENSMUST00000102168 (Mir503-201) 53053984-53054054 miRNA
ENSMUSG00000087365 (C430049B03Rik)
RIKEN cDNA C430049B03 gene 		ENSMUST00000129764 (C430049B03Rik-003) 53055207-53057160 processed_transcript
ENSMUST00000151099 (C430049B03Rik-002) 53056193-53057190 processed_transcript
ENSMUST00000152109 (C430049B03Rik-004) 53055770-53057188 processed_transcript
ENSMUST00000155622 (C430049B03Rik-001) 53055046-53057190 processed_transcript
ENSMUSG00000101603 (RP23-173F3.5)
predicted gene 28730 		ENSMUST00000185939 (RP23-173F3.5-003) 53051202-53052599 lincRNA
ENSMUST00000186426 (RP23-173F3.5-002) 53051307-53053159 lincRNA
ENSMUST00000191072 (RP23-173F3.5-001) 53051194-53052615 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JX_0001ENSG00000165704ENST00000298556ENST00000462974ENST00000475720ENSG00000170965ENST00000359237ENST00000466797ENST00000473897ENST00000476971ENSG00000207755ENST00000385022ENSG00000223749ENST00000414769ENST00000440570ENST00000441492ENST00000445415ENST00000457876ENSG00000226107ENST00000438135ENSG00000227060ENST00000434384ENST00000592070ENSG00000235813ENST00000440614ENSG00000236509ENST00000443666ENSG00000237432ENST00000422385CIL_0000JX_0002ENSMUSG00000025630ENSMUST00000026723ENSMUSG00000061082ENSMUST00000074861ENSMUST00000114843ENSMUST00000174390ENSMUSG00000065503ENSMUST00000083569ENSMUSG00000076122ENSMUST00000102168ENSMUSG00000087365ENSMUST00000129764ENSMUST00000151099ENSMUST00000152109ENSMUST00000155622ENSMUSG00000101603ENSMUST00000185939ENSMUST00000186426ENSMUST00000191072
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JX_0001ENSG00000165704ENST00000298556ENST00000475720ENSG00000170965ENST00000359237ENST00000466797ENST00000473897ENST00000476971ENSG00000207755ENST00000385022ENSG00000223749ENST00000414769ENST00000440570ENST00000441492ENST00000445415ENST00000457876ENSG00000226107ENST00000438135ENSG00000227060ENST00000434384ENST00000592070ENSG00000235813ENST00000440614ENSG00000236509ENST00000443666ENSG00000237432ENST00000422385CIL_0000JX_0002ENSMUSG00000025630ENSMUST00000026723ENSMUSG00000061082ENSMUST00000074861ENSMUST00000114843ENSMUST00000174390ENSMUSG00000065503ENSMUST00000083569ENSMUSG00000076122ENSMUST00000102168ENSMUSG00000087365ENSMUST00000129764ENSMUST00000151099ENSMUST00000152109ENSMUST00000155622ENSMUSG00000101603ENSMUST00000185939ENSMUST00000186426ENSMUST00000191072
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165704 ENST00000298556 8.058±0.00 11.006±0.00 1.706±0.00 22.405±14.36 3.158±1.69 4.315±1.86 3.249±2.67 13.108±9.69 3.053±1.44 5.919±5.27 6.345±0.00 10.515±2.75 5.776±1.29 27.272±9.82
ENST00000462974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475720 N/A N/A 2.532±0.00 9.270±0.00 2.564±0.00 4.276±0.00 1.637±0.00 3.308±0.00 1.418±0.00 1.194±0.00 1.851±0.00 28.649±0.00 17.304±0.00 78.268±0.00
ENSG00000170965 ENST00000359237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 20.527±12.03 0.174±0.00
ENST00000466797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENST00000473897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A 0.263±0.00
ENST00000476971 N/A N/A N/A N/A N/A 0.013±0.00 0.037±0.00 N/A N/A N/A 0.063±0.00 0.132±0.00 3.093±0.14 N/A
ENSG00000207755 ENST00000385022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.649±0.00 N/A N/A
ENSG00000223749 ENST00000414769 N/A N/A N/A 0.057±0.00 N/A 0.095±0.00 N/A 0.861±0.23 N/A 0.178±0.00 N/A 1.259±1.13 6.576±3.17 2.049±0.98
ENST00000440570 N/A 0.246±0.00 N/A N/A 0.466±0.00 N/A 0.297±0.00 1.482±0.00 N/A N/A N/A 1.976±1.66 6.647±0.47 4.502±0.00
ENST00000441492 0.101±0.00 N/A N/A N/A N/A N/A 0.205±0.00 N/A 1.031±0.00 N/A 0.273±0.00 0.405±0.00 N/A N/A
ENST00000445415 N/A N/A N/A N/A N/A 0.231±0.00 N/A 2.675±0.00 N/A N/A N/A 0.721±0.00 N/A 8.989±0.00
ENST00000457876 0.038±0.00 0.065±0.00 N/A N/A N/A N/A N/A 0.489±0.00 0.487±0.32 N/A N/A N/A N/A 2.225±0.00
ENSG00000226107 ENST00000438135 N/A 0.407±0.00 N/A 1.217±0.91 0.050±0.00 N/A 0.194±0.00 0.051±0.00 2.851±0.00 1.251±0.53 N/A 0.449±0.35 0.182±0.09 0.689±0.37
ENSG00000227060 ENST00000434384 N/A 0.052±0.00 N/A 0.202±0.09 N/A N/A 0.156±0.12 0.495±0.00 N/A N/A 0.461±0.00 N/A 0.257±0.09 0.559±0.09
ENST00000592070 0.148±0.00 N/A N/A N/A N/A 0.283±0.00 0.323±0.00 N/A N/A N/A N/A 0.504±0.00 N/A 0.089±0.00
ENSG00000235813 ENST00000440614 0.147±0.00 0.417±0.00 N/A 0.223±0.00 0.360±0.00 0.066±0.00 0.218±0.00 0.372±0.00 0.122±0.00 0.133±0.00 0.015±0.00 0.075±0.02 0.059±0.00 0.209±0.00
ENSG00000236509 ENST00000443666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 0.050±0.00
ENSG00000237432 ENST00000422385 0.023±0.00 0.073±0.00 N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.022±0.00 N/A N/A 0.101±0.03 0.054±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025630 ENSMUST00000026723 20.592±4.10 19.685±3.06 52.627±6.56 42.604±37.34 11.925±3.04 11.392±1.48 13.160±3.12 17.924±2.92 41.435±24.67 13.575±4.11 11.883±0.35 16.252±16.96 71.570±31.16 4.232±0.68
ENSMUSG00000061082 ENSMUST00000074861 0.157±0.00 N/A 0.008±0.00 0.154±0.04 0.088±0.00 0.021±0.00 0.026±0.00 N/A 0.430±0.25 N/A N/A 0.762±0.45 67.719±56.97 1.034±0.56
ENSMUST00000114843 N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A 58.338±72.10 N/A
ENSMUST00000174390 0.103±0.04 N/A 0.020±0.00 0.088±0.03 0.136±0.02 0.051±0.02 0.111±0.05 0.033±0.00 0.267±0.20 0.038±0.00 0.062±0.00 0.696±0.47 N/A 1.935±0.92
ENSMUSG00000065503 ENSMUST00000083569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1234.002±1158.84 11414.105±8304.59 N/A
ENSMUSG00000076122 ENSMUST00000102168 65106.500±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 172941.000±0.00 N/A N/A
ENSMUSG00000087365 ENSMUST00000129764 0.113±0.00 N/A N/A N/A N/A N/A 0.124±0.00 0.301±0.18 N/A N/A 0.081±0.03 N/A 36.749±18.27 0.513±0.11
ENSMUST00000151099 0.118±0.00 N/A N/A 0.085±0.00 0.268±0.00 N/A 0.127±0.05 N/A N/A N/A 0.143±0.03 N/A N/A 0.209±0.00
ENSMUST00000152109 0.702±0.48 N/A 0.993±0.47 0.940±0.83 1.139±0.00 0.626±0.16 0.245±0.04 0.831±0.23 0.476±0.43 2.569±1.14 0.093±0.02 4.897±0.00 48.801±19.18 0.878±0.65
ENSMUST00000155622 N/A 37.364±11.22 N/A N/A 1.866±0.78 0.549±0.38 0.357±0.10 0.663±0.68 0.155±0.07 3.472±1.78 0.139±0.07 24.291±8.20 12.818±0.00 0.297±0.15
ENSMUSG00000101603 ENSMUST00000185939 N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A 0.228±0.11 4.202±0.00 N/A
ENSMUST00000186426 0.226±0.00 N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A 0.281±0.17 5.822±0.00 N/A
ENSMUST00000191072 N/A N/A N/A 0.024±0.00 0.104±0.00 N/A N/A N/A N/A 0.155±0.03 N/A 0.424±0.00 15.482±0.00 N/A

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