C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell leukemia, homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174674 Tlx2-002 ENSMUSG00000068327 10090 - 6:83068324-83070225 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverPlacentaTestisENSMUST00000174674
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Placenta Testis
ENSMUST00000174674 5.277±2.50 0.049±0.01 0.024±0.01 0.093±0.00 0.588±0.52 0.037±0.00 0.075±0.04 0.012±0.01 0.029±0.01 0.104±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001707 IMP mesoderm formation
GO:0003677 ISA DNA binding
GO:0003700 ISA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISA nucleus
GO:0005737 IDA cytoplasm
GO:0006357 ISA regulation of transcription from RNA polymerase II promoter
GO:0043565 IEA sequence-specific DNA binding
GO:0048484 IMP enteric nervous system development
GO:0050774 IDA negative regulation of dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233638 TLX2-001 protein_coding Homo_sapiens 0 745
ENST00000296921 TLX3-001 protein_coding Homo_sapiens 0 233
ENST00000497238 TLX2-003 processed_transcript Homo_sapiens 0 285
ENST00000621092 TLX2-201 protein_coding Homo_sapiens 0 344

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