C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with SH3 domain, ankyrin repeat and PH domain1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176384 Asap1-002 ENSMUSG00000022377 10090 - 15:64088619-64382737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000176384
Transcript ID Brain Testis
ENSMUST00000176384 2.788±1.05 9.265±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZM CIL_0004ZM_0002 CGP 15:63929097-64382919
CIL_0004ZP CIL_0004ZP_0002 CGP 15:64086857-64922296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 IEA cytoplasm
GO:0008060 IDA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357668 ASAP1-201 protein_coding Homo_sapiens 0 1886
ENST00000518721 ASAP1-001 protein_coding Homo_sapiens 0 1886
ENST00000519169 ASAP1-003 retained_intron Homo_sapiens 0 861
ENST00000519483 ASAP1-015 protein_coding Homo_sapiens 0 1685
ENST00000520189 ASAP1-014 retained_intron Homo_sapiens 0 298
ENST00000520342 ASAP1-010 protein_coding Homo_sapiens 0 745
ENST00000520927 ASAP1-016 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000521057 ASAP1-013 retained_intron Homo_sapiens 0 654
ENST00000521075 ASAP1-002 nonsense_mediated_decay Homo_sapiens 0 1886
ENST00000521426 ASAP1-007 protein_coding Homo_sapiens 0 433
ENST00000524124 ASAP1-004 protein_coding Homo_sapiens 0 1895
ENST00000524299 ASAP1-006 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000524367 ASAP1-009 protein_coding Homo_sapiens 0 1075

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