C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GDP dissociation inhibitor (GDI) gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176961 Arhgdig-005 ENSMUSG00000073433 10090 - 17:26196226-26201143 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverPlacentaENSMUST00000176961
Transcript ID Colon Liver Placenta
ENSMUST00000176961 4.233±0.28 3.428±0.34 0.150±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005083 IDA small GTPase regulator activity
GO:0005092 IDA GDP-dissociation inhibitor activity
GO:0005094 IEA Rho GDP-dissociation inhibitor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0016020 IDA membrane
GO:0032880 IDA regulation of protein localization
GO:0043547 IEA positive regulation of GTPase activity
GO:0050790 IDA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219406 PDIA2-001 protein_coding Homo_sapiens 0 1146
ENST00000219409 ARHGDIG-001 protein_coding Homo_sapiens 0 586
ENST00000286091 PDIA4-001 protein_coding Homo_sapiens 0.00000000004 75
ENST00000404312 PDIA2-008 protein_coding Homo_sapiens 0 1114
ENST00000435833 PDIA2-007 protein_coding Homo_sapiens 0 392
ENST00000447871 ARHGDIG-004 protein_coding Homo_sapiens 0 405
ENST00000467212 PDIA2-003 retained_intron Homo_sapiens 0 918
ENST00000477621 ARHGDIG-003 retained_intron Homo_sapiens 0 363
ENST00000482665 PDIA2-004 retained_intron Homo_sapiens 0 501

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