C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GDP dissociation inhibitor (GDI) gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219409 ARHGDIG-001 ENSG00000242173 9606 + 16:280606-283010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000219409
Transcript ID Brain
ENST00000219409 59.041±33.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005083 IEA small GTPase regulator activity
GO:0005092 IEA GDP-dissociation inhibitor activity
GO:0005094 IEA Rho GDP-dissociation inhibitor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0007162 TAS negative regulation of cell adhesion
GO:0007264 TAS small GTPase mediated signal transduction
GO:0007266 TAS Rho protein signal transduction
GO:0016020 IEA membrane
GO:0016023 TAS cytoplasmic membrane-bounded vesicle
GO:0032880 IEA regulation of protein localization
GO:0043547 IEA positive regulation of GTPase activity
GO:0050790 IEA regulation of catalytic activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025019 Arhgdig-001 protein_coding Mus_musculus 0 604
ENSMUST00000176961 Arhgdig-005 nonsense_mediated_decay Mus_musculus 0 586
ENSMUST00000121959 Arhgdig-003 protein_coding Mus_musculus 0 449
ENSMUST00000155556 Arhgdig-002 retained_intron Mus_musculus 0 211

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