C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTF8, chromosome transmission fidelity factor 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177068 Chtf8-001 ENSMUSG00000046691 10090 - 8:106883863-106893593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177068
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177068 31.240±7.75 14.437±3.66 24.110±1.96 11.686±8.19 22.776±5.87 24.658±5.58 10.849±1.03 28.576±2.16 16.988±4.12 28.299±4.58 3.155±0.97 26.159±9.84 11.492±8.13 11.730±5.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004I6 CIL_0004I6_0002 CGP 8:106683068-106884566
CIL_0004I7 CIL_0004I7_0002 CGP 8:106870242-106893601
CIL_0004CT CIL_0004CT_0002 CGP 8:106883863-106923093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219322 HAS3-002 protein_coding Homo_sapiens 0 289
ENST00000306585 CHTF8-011 protein_coding Homo_sapiens 0 1733
ENST00000398235 CHTF8-002 protein_coding Homo_sapiens 0 1182
ENST00000414660 CHTF8P1-001 processed_pseudogene Homo_sapiens 0 931
ENST00000448552 CHTF8-001 protein_coding Homo_sapiens 0 1733
ENST00000518041 CHTF8-008 protein_coding Homo_sapiens 0 274
ENST00000519520 CHTF8-003 protein_coding Homo_sapiens 0 760
ENST00000519534 CHTF8-009 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000520529 CHTF8-006 protein_coding Homo_sapiens 0 455
ENST00000522091 CHTF8-004 protein_coding Homo_sapiens 0 425
ENST00000522497 CHTF8-005 protein_coding Homo_sapiens 0 880
ENST00000523421 CHTF8-007 protein_coding Homo_sapiens 0 412
ENST00000567763 CHTF8-010 protein_coding Homo_sapiens 0 706

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