C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5808
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178090 Gm5808-201 ENSMUSG00000096448 10090 - 15:99555836-99556192 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENSMUST00000178090
Transcript ID Heart Liver
ENSMUST00000178090 0.178±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IN CIL_0000IN_0002 CGP 15:99497005-99584545
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333119 UXT-001 protein_coding Homo_sapiens 0 455
ENST00000335890 UXT-002 protein_coding Homo_sapiens 0 455
ENST00000376964 UXT-003 retained_intron Homo_sapiens 1e-36 158
ENST00000460840 UXT-004 processed_transcript Homo_sapiens 6e-37 158
ENST00000485641 UXT-005 nonsense_mediated_decay Homo_sapiens 8e-37 158

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