C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitously-expressed, prefoldin-like chaperone
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333119 UXT-001 ENSG00000126756 9606 - X:47651798-47659161 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333119 64.448±0.00 102.000±0.00 0.939±0.00 22.163±8.51 41.884±24.57 47.449±35.40 21.287±17.60 40.908±25.37 35.248±26.77 46.759±34.97 32.789±19.33 97.292±60.84 97.402±15.13 66.446±13.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000578 CIL_000578_0001 CGP X:47635521-47659161

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000226 IMP microtubule cytoskeleton organization
GO:0000930 IDA gamma-tubulin complex
GO:0001106 IDA RNA polymerase II transcription corepressor activity
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005815 IDA microtubule organizing center
GO:0005856 IDA cytoskeleton
GO:0006351 IEA transcription, DNA-templated
GO:0006457 IEA protein folding
GO:0008017 TAS microtubule binding
GO:0016272 IEA prefoldin complex
GO:0047497 TAS mitochondrion transport along microtubule
GO:0048487 IDA beta-tubulin binding
GO:0051082 IEA unfolded protein binding
GO:0051297 IMP centrosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150719 Uxt-005 retained_intron Mus_musculus 0 699
ENSMUST00000123836 Uxt-001 protein_coding Mus_musculus 0 697
ENSMUST00000001162 Uxt-003 processed_transcript Mus_musculus 0 584
ENSMUST00000142341 Uxt-002 retained_intron Mus_musculus 0 507
ENSMUST00000178090 Gm5808-201 processed_pseudogene Mus_musculus 0 455
ENSMUST00000129899 Uxt-004 processed_transcript Mus_musculus 0 344

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