C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2610015P09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178400 2610015P09Rik-201 ENSMUSG00000022701 10090 + 16:43889902-43964314 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178400
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178400 0.202±0.00 0.172±0.01 0.944±0.23 0.295±0.00 0.192±0.09 0.157±0.00 0.070±0.00 0.570±0.10 0.347±0.20 0.421±0.16 0.288±0.14 1.478±2.37 1.009±0.67 29.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CD CIL_0003CD_0002 CGP 16:43762221-43926809
CIL_0003CE CIL_0003CE_0002 CGP 16:43861407-43964314
CIL_0003CB CIL_0003CB_0002 CGP 16:43889800-43979093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295878 KIAA1407-001 protein_coding Homo_sapiens 0 1796
ENST00000460813 KIAA1407-002 nonsense_mediated_decay Homo_sapiens 0 1142
ENST00000463695 KIAA1407-004 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000481358 KIAA1407-003 retained_intron Homo_sapiens 0 1232
ENST00000483766 KIAA1407-005 protein_coding Homo_sapiens 0 442
ENST00000491000 KIAA1407-006 protein_coding Homo_sapiens 0 1387

Loading