C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003CE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016093-ENSDARG00000027851 CGP 7955 24:21647271-21887995
GeneTranscriptPositionBiotype
ENSDARG00000003899 (zdhhc23b)
zinc finger, DHHC-type containing 23b 		ENSDART00000010126 (zdhhc23b-001) 21731288-21740059 protein_coding
ENSDARG00000016093 (qtrtd1)
queuine tRNA-ribosyltransferase domain containing 1 		ENSDART00000129085 (qtrtd1-201) 21647271-21698443 protein_coding
ENSDART00000136507 (qtrtd1-002) 21686456-21698899 protein_coding
ENSDART00000140786 (qtrtd1-001) 21668138-21698969 protein_coding
ENSDARG00000027851 (zgc:92218)
zgc:92218 		ENSDART00000028542 (zgc:92218-001) 21700608-21728634 protein_coding
ENSDART00000105938 (zgc:92218-201) 21700608-21887995 protein_coding
ENSDARG00000074335 (boc)
brother of CDO 		ENSDART00000111025 (boc-001) 21814695-21867397 protein_coding
ENSDART00000115000 (boc-201) 21814693-21849509 protein_coding
ENSDART00000149664 (boc-003) 21837321-21839623 retained_intron
ENSDART00000149815 (boc-002) 21834985-21837405 retained_intron
ENSDARG00000076238 (GRAMD1C)
GRAM domain containing 1C 		ENSDART00000110559 (GRAMD1C-201) 21741431-21757165 protein_coding
ENSDART00000154073 (GRAMD1C-002) 21745627-21747848 retained_intron
ENSDART00000154249 (GRAMD1C-001) 21741433-21758552 protein_coding
ENSDART00000155652 (GRAMD1C-003) 21747774-21752752 processed_transcript
ENSDARG00000076318 (atp6v1ab)
ATPase, H+ transporting, lysosomal V1 subunit Ab 		ENSDART00000114661 (atp6v1ab-201) 21762573-21779079 protein_coding
ENSDART00000154259 (atp6v1ab-001) 21762572-21780574 protein_coding
CIL_0003CE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022704-ENSMUSG00000022701 CGP 10090 16:43861407-43964314
GeneTranscriptPositionBiotype
ENSMUSG00000022701 (2610015P09Rik)
RIKEN cDNA 2610015P09 gene 		ENSMUST00000122014 (2610015P09Rik-004) 43889899-43939567 protein_coding
ENSMUST00000122440 (2610015P09Rik-001) 43939124-43964314 protein_coding
ENSMUST00000132859 (2610015P09Rik-006) 43889800-43964314 protein_coding
ENSMUST00000145999 (2610015P09Rik-002) 43939003-43943550 processed_transcript
ENSMUST00000151183 (2610015P09Rik-005) 43889940-43908482 protein_coding
ENSMUST00000178400 (2610015P09Rik-201) 43889902-43964314 protein_coding
ENSMUSG00000022704 (Qtrtd1)
queuine tRNA-ribosyltransferase domain containing 1 		ENSMUST00000023387 (Qtrtd1-001) 43861407-43889685 protein_coding
ENSMUST00000124674 (Qtrtd1-005) 43880299-43889656 retained_intron
ENSMUST00000131360 (Qtrtd1-003) 43868946-43889656 retained_intron
ENSMUST00000134792 (Qtrtd1-006) 43876783-43889655 nonsense_mediated_decay
ENSMUST00000143858 (Qtrtd1-008) 43862784-43867555 retained_intron
ENSMUST00000144626 (Qtrtd1-009) 43867507-43869395 retained_intron
ENSMUST00000146343 (Qtrtd1-004) 43863030-43926809 retained_intron
ENSMUST00000151963 (Qtrtd1-007) 43871673-43876964 retained_intron
ENSMUST00000156568 (Qtrtd1-002) 43861407-43889648 retained_intron
ENSMUSG00000096684 (Gm25989)
predicted gene, 25989 		ENSMUST00000158761 (Gm25989-201) 43886682-43886814 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CE_0001ENSDARG00000003899ENSDART00000010126ENSDARG00000016093ENSDART00000129085ENSDART00000136507ENSDART00000140786ENSDARG00000027851ENSDART00000028542ENSDART00000105938ENSDARG00000074335ENSDART00000111025ENSDART00000115000ENSDART00000149664ENSDART00000149815ENSDARG00000076238ENSDART00000110559ENSDART00000154073ENSDART00000154249ENSDART00000155652ENSDARG00000076318ENSDART00000114661ENSDART00000154259CIL_0003CE_0002ENSMUSG00000022701ENSMUST00000122014ENSMUST00000122440ENSMUST00000132859ENSMUST00000145999ENSMUST00000151183ENSMUST00000178400ENSMUSG00000022704ENSMUST00000023387ENSMUST00000124674ENSMUST00000131360ENSMUST00000134792ENSMUST00000143858ENSMUST00000144626ENSMUST00000146343ENSMUST00000151963ENSMUST00000156568ENSMUSG00000096684ENSMUST00000158761
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CE_0001ENSDARG00000003899ENSDART00000010126ENSDARG00000016093ENSDART00000129085ENSDART00000140786ENSDARG00000027851ENSDART00000028542ENSDART00000105938ENSDARG00000074335ENSDART00000111025ENSDART00000115000ENSDARG00000076238ENSDART00000110559ENSDART00000154249ENSDART00000155652ENSDARG00000076318ENSDART00000114661ENSDART00000154259CIL_0003CE_0002ENSMUSG00000022701ENSMUST00000122014ENSMUST00000122440ENSMUST00000132859ENSMUST00000178400ENSMUSG00000022704ENSMUST00000023387ENSMUST00000143858ENSMUST00000144626ENSMUST00000151963ENSMUST00000156568ENSMUSG00000096684ENSMUST00000158761
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003899 ENSDART00000010126 N/A N/A N/A 0.473±0.40 N/A N/A 1.186±0.64 3.054±0.00 0.250±0.00 N/A 0.819±0.00 N/A N/A N/A
ENSDARG00000016093 ENSDART00000129085 N/A N/A N/A N/A N/A N/A 0.785±0.00 0.714±0.00 N/A N/A 0.080±0.00 N/A N/A N/A
ENSDART00000136507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140786 N/A N/A N/A 0.782±0.27 N/A N/A 1.045±0.54 4.222±2.10 0.433±0.00 N/A 0.301±0.00 N/A N/A N/A
ENSDARG00000027851 ENSDART00000028542 N/A N/A N/A 0.185±0.10 N/A N/A 0.189±0.02 0.278±0.03 N/A N/A 0.017±0.00 N/A N/A N/A
ENSDART00000105938 N/A N/A N/A 0.185±0.10 N/A N/A 0.141±0.07 0.278±0.03 N/A N/A 0.017±0.00 N/A N/A N/A
ENSDARG00000074335 ENSDART00000111025 N/A N/A N/A 1.689±0.71 N/A N/A 1.604±0.71 1.810±0.00 N/A N/A 0.828±0.00 N/A N/A N/A
ENSDART00000115000 N/A N/A N/A 1.611±0.19 N/A N/A 5.353±0.25 4.015±0.59 0.178±0.00 N/A 1.186±0.00 N/A N/A N/A
ENSDART00000149664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076238 ENSDART00000110559 N/A N/A N/A 0.148±0.03 N/A N/A 0.344±0.31 2.011±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000154073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A
ENSDART00000155652 N/A N/A N/A 0.065±0.00 N/A N/A 0.227±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076318 ENSDART00000114661 N/A N/A N/A 17.837±8.82 N/A N/A 6.053±2.60 11.805±5.23 0.284±0.00 N/A N/A N/A N/A N/A
ENSDART00000154259 N/A N/A N/A 46.686±8.09 N/A N/A 2.036±0.69 7.060±0.00 N/A N/A 3.202±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022701 ENSMUST00000122014 0.493±0.29 N/A 0.766±0.00 0.501±0.30 0.660±0.28 0.510±0.00 0.168±0.00 0.510±0.05 0.171±0.00 0.675±0.09 0.259±0.00 1.552±1.24 0.961±0.39 1.375±0.00
ENSMUST00000122440 N/A 0.871±0.29 1.161±0.00 1.098±0.62 0.306±0.08 0.675±0.23 0.405±0.24 0.785±0.23 0.137±0.09 0.304±0.00 0.184±0.00 1.810±2.27 3.596±0.00 1.723±0.31
ENSMUST00000132859 N/A N/A 0.419±0.00 0.079±0.00 N/A N/A 0.214±0.12 N/A 0.150±0.03 N/A 0.221±0.10 1.722±0.00 0.208±0.09 N/A
ENSMUST00000145999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178400 0.202±0.00 0.172±0.01 0.944±0.23 0.295±0.00 0.192±0.09 0.157±0.00 0.070±0.00 0.570±0.10 0.347±0.20 0.421±0.16 0.288±0.14 1.478±2.37 1.009±0.67 29.039±0.00
ENSMUSG00000022704 ENSMUST00000023387 N/A 1.889±1.06 N/A 1.738±1.25 N/A 1.027±0.00 N/A 2.066±0.00 1.221±0.25 1.965±0.00 N/A 4.162±0.16 2.419±0.00 3.073±0.00
ENSMUST00000124674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143858 N/A N/A N/A 4.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.921±0.00 N/A
ENSMUST00000144626 N/A 4.706±0.42 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.307±0.00 N/A N/A
ENSMUST00000156568 1.687±0.95 1.041±0.27 1.704±0.51 1.540±0.07 1.514±0.28 1.016±0.19 0.784±0.19 0.922±0.26 0.976±0.34 1.291±0.41 0.776±0.23 2.020±0.70 0.848±0.34 0.616±0.04
ENSMUSG00000096684 ENSMUST00000158761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.826±0.00 10.906±0.00 N/A

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