C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9825
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178598 Gm9825-201 ENSMUSG00000096403 10090 - 6:7981829-7983430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178598
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178598 3.530±2.25 4.798±1.10 0.211±0.07 7.256±6.05 1.227±0.69 0.906±0.43 0.290±0.09 0.462±0.22 1.163±3.30 1.451±0.29 0.064±0.04 4.053±3.75 11.961±12.84 0.809±0.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301730 RNPS1-003 protein_coding Homo_sapiens 0 1035
ENST00000320225 RNPS1-001 protein_coding Homo_sapiens 0 1035
ENST00000397086 RNPS1-005 protein_coding Homo_sapiens 0 1035
ENST00000507437 RNPS1P1-001 processed_pseudogene Homo_sapiens 0 983
ENST00000561518 RNPS1-014 protein_coding Homo_sapiens 0 942
ENST00000561718 RNPS1-004 protein_coding Homo_sapiens 0 1035
ENST00000562690 RNPS1-013 protein_coding Homo_sapiens 0 374
ENST00000564311 RNPS1-024 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000564601 RNPS1-015 protein_coding Homo_sapiens 0 556
ENST00000564764 RNPS1-020 protein_coding Homo_sapiens 0 479
ENST00000565678 RNPS1-007 protein_coding Homo_sapiens 0 1035
ENST00000565870 RNPS1-022 protein_coding Homo_sapiens 0 1002
ENST00000566180 RNPS1-017 protein_coding Homo_sapiens 0 427
ENST00000566397 RNPS1-009 protein_coding Homo_sapiens 0 1035
ENST00000566458 RNPS1-002 protein_coding Homo_sapiens 0 1072
ENST00000567147 RNPS1-027 protein_coding Homo_sapiens 0 769
ENST00000568631 RNPS1-006 protein_coding Homo_sapiens 0 1035
ENST00000569598 RNPS1-025 protein_coding Homo_sapiens 0 701
ENST00000570051 RNPS1-026 retained_intron Homo_sapiens 0 791

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