C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 21378
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178830 Gm21378-201 ENSMUSG00000095709 10090 - 13:120099349-120100332 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungMuscleOvaryPlacentaENSMUST00000178830
Transcript ID Bladder Brain Liver Lung Muscle Ovary Placenta
ENSMUST00000178830 0.115±0.11 0.129±0.12 0.325±0.04 0.111±0.00 0.032±0.00 0.028±0.00 0.065±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124168 ppp4r2b-201 protein_coding Danio_rerio 0 213
ENSDART00000075486 ppp4r2b-001 protein_coding Danio_rerio 0 213
ENST00000356692 PPP4R2-001 protein_coding Homo_sapiens 0 1166
ENST00000411669 AC024937.4-001 processed_pseudogene Homo_sapiens 0 946
ENST00000429866 AC024937.6-001 processed_pseudogene Homo_sapiens 0 946
ENST00000460360 PPP4R2-006 protein_coding Homo_sapiens 0 355
ENST00000470976 PPP4R2-004 retained_intron Homo_sapiens 0 638
ENST00000476505 PPP4R2-002 protein_coding Homo_sapiens 0 440
ENST00000482242 PPP4R2-003 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000488810 PPP4R2-005 protein_coding Homo_sapiens 0 638
ENST00000504656 CTD-2083E4.5-001 processed_pseudogene Homo_sapiens 0 959
ENST00000507981 RP11-496H1.1-001 processed_pseudogene Homo_sapiens 0 926
ENST00000512270 CTD-2012J19.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000603917 RP11-141C7.3-001 processed_pseudogene Homo_sapiens 0 712

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