C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frizzled homolog 6 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179165 Fzd6-202 ENSMUSG00000022297 10090 + 15:39006280-39038186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000179165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179165 6.606±3.67 1.311±0.31 11.497±0.81 2.259±0.98 1.302±0.88 2.133±0.81 2.704±1.43 2.929±0.41 0.751±0.39 8.066±4.09 0.866±0.13 4.877±2.25 2.704±1.95 1.198±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A9 CIL_0006A9_0002 CGP 15:38933142-39038186
CIL_00060D CIL_00060D_0002 CGP 15:39006280-39087121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IBA angiogenesis
GO:0001736 IGI establishment of planar polarity
GO:0001843 IGI neural tube closure
GO:0001942 IMP hair follicle development
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005886 TAS plasma membrane
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0007199 IBA G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger
GO:0007409 IBA axonogenesis
GO:0008406 IBA gonad development
GO:0016021 IEA integral component of membrane
GO:0016327 IDA apicolateral plasma membrane
GO:0017147 IPI Wnt-protein binding
GO:0030165 IBA PDZ domain binding
GO:0030168 IMP platelet activation
GO:0030901 IGI midbrain development
GO:0032589 IBA neuron projection membrane
GO:0033278 IGI cell proliferation in midbrain
GO:0035880 IMP embryonic nail plate morphogenesis
GO:0042472 IGI inner ear morphogenesis
GO:0042813 IBA Wnt-activated receptor activity
GO:0045177 IDA apical part of cell
GO:0060070 IBA canonical Wnt signaling pathway
GO:0060071 IDA Wnt signaling pathway, planar cell polarity pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358755 FZD6-201 protein_coding Homo_sapiens 0 2041
ENST00000519011 FZD6-003 nonsense_mediated_decay Homo_sapiens 0 935
ENST00000521195 FZD6-005 nonsense_mediated_decay Homo_sapiens 0 1788
ENST00000522484 FZD6-004 nonsense_mediated_decay Homo_sapiens 0 1592
ENST00000522566 FZD6-001 protein_coding Homo_sapiens 0 2015
ENST00000523739 FZD6-002 protein_coding Homo_sapiens 0 1890
ENST00000523933 FZD6-006 nonsense_mediated_decay Homo_sapiens 0 898

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