C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frizzled class receptor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358755 FZD6-201 ENSG00000164930 9606 + 8:103298831-103332859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000358755
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000358755 4.001±0.00 1.311±0.00 1.035±0.00 1.749±0.83 1.732±1.14 1.326±0.32 4.421±0.00 2.195±1.62 5.512±0.00 1.562±1.27 2.801±1.39 1.643±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A9 CIL_0006A9_0001 CGP 8:103140710-103332866
CIL_00060D CIL_00060D_0001 CGP 8:103298433-103382997

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IBA angiogenesis
GO:0001736 IBA establishment of planar polarity
GO:0001843 IBA neural tube closure
GO:0001942 IEA hair follicle development
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IBA cytoplasm
GO:0005886 TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007199 IBA G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger
GO:0007409 IBA axonogenesis
GO:0008406 IBA gonad development
GO:0016020 IEA membrane
GO:0016327 IBA apicolateral plasma membrane
GO:0017147 IBA Wnt-protein binding
GO:0030165 IBA PDZ domain binding
GO:0030168 IEA platelet activation
GO:0030901 IEA midbrain development
GO:0031625 IPI ubiquitin protein ligase binding
GO:0032589 IBA neuron projection membrane
GO:0033278 IBA cell proliferation in midbrain
GO:0035567 IDA non-canonical Wnt signaling pathway
GO:0035880 IEA embryonic nail plate morphogenesis
GO:0042472 IBA inner ear morphogenesis
GO:0042813 IDA Wnt-activated receptor activity
GO:0043433 IDA negative regulation of sequence-specific DNA binding transcription factor activity
GO:0045177 IBA apical part of cell
GO:0060071 IEA Wnt signaling pathway, planar cell polarity pathway
GO:0090090 IMP negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179165 Fzd6-202 protein_coding Mus_musculus 0 2041
ENSMUST00000022906 Fzd6-201 protein_coding Mus_musculus 0 2015

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