C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar complex associated 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179543 Noc2l-201 ENSMUSG00000095567 10090 + 4:156236010-156247616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000179543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179543 21.427±3.62 24.540±9.50 23.024±1.98 47.495±3.65 24.351±6.61 29.563±3.02 11.246±1.94 21.717±3.14 32.781±25.30 21.274±1.41 10.465±0.97 42.948±18.47 35.295±30.19 4.539±2.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISA negative regulation of transcription from RNA polymerase II promoter
GO:0002039 ISA p53 binding
GO:0002903 IEA negative regulation of B cell apoptotic process
GO:0003682 IEA chromatin binding
GO:0003714 IEA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 ISA nucleus
GO:0005654 IEA nucleoplasm
GO:0005730 IEA nucleolus
GO:0031491 IEA nucleosome binding
GO:0031493 ISA nucleosomal histone binding
GO:0031497 IEA chromatin assembly
GO:0032066 IEA nucleolus to nucleoplasm transport
GO:0034644 IEA cellular response to UV
GO:0035067 ISA negative regulation of histone acetylation
GO:0042393 ISA histone binding
GO:0044822 IEA poly(A) RNA binding
GO:0070491 IEA repressing transcription factor binding
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091662 noc2l-201 protein_coding Danio_rerio 0 252
ENSDART00000122945 noc2l-001 protein_coding Danio_rerio 0 252
ENST00000327044 NOC2L-001 protein_coding Homo_sapiens 0 1441
ENST00000452600 AC018804.7-001 transcribed_processed_pseudogene Homo_sapiens 0 1190
ENST00000477976 NOC2L-005 retained_intron Homo_sapiens 0 992
ENST00000487214 NOC2L-006 processed_transcript Homo_sapiens 0 440

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