C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar complex associated 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327044 NOC2L-001 ENSG00000188976 9606 - 1:944204-959290 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327044 14.547±0.00 22.770±0.00 1.990±0.00 10.222±4.53 14.145±9.97 9.789±8.54 6.426±4.46 7.456±5.11 7.875±6.16 8.076±6.58 25.232±0.00 26.370±18.77 21.781±5.59 33.165±2.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X8 CIL_0000X8_0002 CGP 1:924880-959309
CIL_0004X6 CIL_0004X6_0002 CGP 1:944204-965715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0002903 IMP negative regulation of B cell apoptotic process
GO:0003682 IDA chromatin binding
GO:0003714 IDA transcription corepressor activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0031491 IDA nucleosome binding
GO:0031497 IDA chromatin assembly
GO:0032066 IDA nucleolus to nucleoplasm transport
GO:0034644 IDA cellular response to UV
GO:0035067 IDA negative regulation of histone acetylation
GO:0042393 IDA histone binding
GO:0044822 IDA poly(A) RNA binding
GO:0070491 IDA repressing transcription factor binding
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179543 Noc2l-201 protein_coding Mus_musculus 0 1441
ENSMUST00000179886 Noc2l-202 protein_coding Mus_musculus 0 1221
ENSDART00000091662 noc2l-201 protein_coding Danio_rerio 0 278
ENSDART00000122945 noc2l-001 protein_coding Danio_rerio 0 278

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