C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CKLF-like MARVEL transmembrane domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179802 Cmtm4-201 ENSMUSG00000096188 10090 - 8:104348191-104395807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000179802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179802 9.201±2.71 19.841±1.34 11.342±2.58 7.400±0.58 6.643±0.55 41.607±3.65 4.134±0.27 18.399±1.21 4.899±2.87 13.771±0.93 1.663±0.14 14.529±2.68 20.414±16.57 1.082±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0003BR CIL_0003BR_0003 CGP 8:104340594-104395807
CIL_0003LZ CIL_0003LZ_0003 CGP 8:104348191-104443047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005125 IEA cytokine activity
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0006935 IEA chemotaxis
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330687 CMTM4-001 protein_coding Homo_sapiens 0 939
ENST00000394106 CMTM4-002 protein_coding Homo_sapiens 0 1029
ENST00000561680 CMTM4-004 protein_coding Homo_sapiens 0 459
ENST00000563952 CMTM4-003 protein_coding Homo_sapiens 0 658
ENST00000581487 CMTM4-005 retained_intron Homo_sapiens 0 246

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