C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calnexin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179865 Canx-201 ENSMUSG00000020368 10090 - 11:50293961-50325673 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F2 CIL_0004F2_0002 CGP 11:50255634-50325673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IEA glycoprotein binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005791 IEA rough endoplasmic reticulum
GO:0005840 IEA ribosome
GO:0007568 IEA aging
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0030424 IEA axon
GO:0032839 IEA dendrite cytoplasm
GO:0034185 IEA apolipoprotein binding
GO:0035255 IEA ionotropic glutamate receptor binding
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0043234 IEA protein complex
GO:0044233 IEA ER-mitochondrion membrane contact site
GO:0044822 IEA poly(A) RNA binding
GO:0048488 IMP synaptic vesicle endocytosis
GO:0061077 IEA chaperone-mediated protein folding
GO:0070062 IEA extracellular vesicular exosome
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane
GO:0072583 IMP clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247461 CANX-001 protein_coding Homo_sapiens 0 2649
ENST00000452673 CANX-005 protein_coding Homo_sapiens 0 2479
ENST00000502296 CANX-006 protein_coding Homo_sapiens 0 481
ENST00000502498 CANX-007 protein_coding Homo_sapiens 0 643
ENST00000502673 CANX-003 protein_coding Homo_sapiens 0 1037
ENST00000503126 CANX-016 processed_transcript Homo_sapiens 0 422
ENST00000504579 CANX-020 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000504734 CANX-002 protein_coding Homo_sapiens 0 2477
ENST00000505090 CANX-012 retained_intron Homo_sapiens 0 281
ENST00000506298 CANX-015 retained_intron Homo_sapiens 0 492
ENST00000506654 CANX-017 protein_coding Homo_sapiens 0 641
ENST00000507307 CANX-008 protein_coding Homo_sapiens 1e-29 134
ENST00000508787 CANX-014 protein_coding Homo_sapiens 0 505
ENST00000509563 CANX-010 protein_coding Homo_sapiens 2e-28 130
ENST00000510810 CANX-018 protein_coding Homo_sapiens 0 584
ENST00000513246 CANX-009 protein_coding Homo_sapiens 0 383
ENST00000514032 CANX-004 nonsense_mediated_decay Homo_sapiens 0 1899
ENST00000514383 CANX-021 protein_coding Homo_sapiens 0 527

Loading