C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teratocarcinoma-derived growth factor, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179882 Tdgf1-ps1-201 ENSMUSG00000095834 10090 + 16:3730510-3731025 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungOvaryPlacentaENSMUST00000179882
Transcript ID Bladder Brain Colon Lung Ovary Placenta
ENSMUST00000179882 0.044±0.00 0.099±0.00 0.404±0.22 0.167±0.07 0.705±0.52 0.100±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SW CIL_0001SW_0002 CGP 16:3707215-3750790

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296144 LRRC2-002 protein_coding Homo_sapiens 2e-27 128
ENST00000296145 TDGF1-001 protein_coding Homo_sapiens 0 320
ENST00000493351 TDGF1P3-001 transcribed_processed_pseudogene Homo_sapiens 0 315
ENST00000542931 TDGF1-201 protein_coding Homo_sapiens 0 320
ENST00000593394 TDGF1P7-001 processed_pseudogene Homo_sapiens 0 296
ENST00000602699 TDGF1P3-002 processed_transcript Homo_sapiens 0 315

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