C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium inwardly rectifying channel, subfamily J, member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180081 Kcnj11-201 ENSMUSG00000096146 10090 - 7:46098725-46099897 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180081
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180081 0.120±0.06 0.723±0.38 0.072±0.03 4.211±0.77 3.965±3.14 0.557±0.17 41.989±20.75 0.507±0.06 0.078±0.06 1.027±0.25 27.991±9.65 0.199±0.10 0.215±0.19 0.150±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZU CIL_0003ZU_0002 CGP 7:46098725-46180033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002931 IEA response to ischemia
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005515 IPI protein binding
GO:0005524 IDA ATP binding
GO:0005635 IEA nuclear envelope
GO:0005739 IEA mitochondrion
GO:0005768 IEA endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0006006 IEA glucose metabolic process
GO:0008022 IEA protein C-terminus binding
GO:0008076 IEA voltage-gated potassium channel complex
GO:0008282 IDA ATP-sensitive potassium channel complex
GO:0010107 IDA potassium ion import
GO:0014704 IEA intercalated disc
GO:0015272 IDA ATP-activated inward rectifier potassium channel activity
GO:0030315 IDA T-tubule
GO:0030506 IPI ankyrin binding
GO:0030673 IEA axolemma
GO:0030955 IC potassium ion binding
GO:0031072 IEA heat shock protein binding
GO:0032355 IEA response to estradiol
GO:0033198 IEA response to ATP
GO:0033574 IEA response to testosterone
GO:0042383 IEA sarcolemma
GO:0042391 IEA regulation of membrane potential
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0043209 IEA myelin sheath
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044325 IEA ion channel binding
GO:0046676 IEA negative regulation of insulin secretion
GO:0050796 IEA regulation of insulin secretion
GO:0050877 IEA neurological system process
GO:0070852 IEA cell body fiber
GO:0071316 IEA cellular response to nicotine
GO:0071333 IEA cellular response to glucose stimulus
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071805 IEA potassium ion transmembrane transport
GO:2001259 IEA positive regulation of cation channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339994 KCNJ11-001 protein_coding Homo_sapiens 0 1480
ENST00000526912 KCNJ11-003 protein_coding Homo_sapiens 0 599
ENST00000528731 KCNJ11-002 protein_coding Homo_sapiens 0 1157
ENST00000528992 KCNJ11-004 protein_coding Homo_sapiens 0 556

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