C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 1110059E24 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180304 1110059E24Rik-006 ENSMUSG00000035171 10090 - 19:21598826-21652610 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000180304
Transcript ID Ovary
ENSMUST00000180304 0.658±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000053 CIL_000053_0002 CGP 19:21581202-21685637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334731 C9orf85-004 protein_coding Homo_sapiens 1e-38 165
ENST00000377027 C9orf85-005 nonsense_mediated_decay Homo_sapiens 4e-39 165
ENST00000377031 C9orf85-003 protein_coding Homo_sapiens 9e-39 165
ENST00000473252 C9orf85-006 nonsense_mediated_decay Homo_sapiens 5e-39 165
ENST00000486911 C9orf85-002 protein_coding Homo_sapiens 1e-37 163

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