C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181263 Pafah1b1-ps1-001 ENSMUSG00000097041 10090 - 3:96407517-96409059 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaTestisENSMUST00000181263
Transcript ID Bladder Brain Liver Placenta Testis
ENSMUST00000181263 0.008±0.00 0.014±0.01 0.009±0.00 0.023±0.01 0.098±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397193 PAFAH1B1-012 processed_transcript Homo_sapiens 0 390
ENST00000397195 PAFAH1B1-001 protein_coding Homo_sapiens 0 643
ENST00000398171 AC133644.3-001 processed_pseudogene Homo_sapiens 0 329
ENST00000449539 AC068491.3-001 transcribed_processed_pseudogene Homo_sapiens 0 503
ENST00000570400 PAFAH1B1-008 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187
ENST00000571495 PAFAH1B1-006 retained_intron Homo_sapiens 0 390
ENST00000572915 PAFAH1B1-003 processed_transcript Homo_sapiens 0 235
ENST00000574468 PAFAH1B1-004 protein_coding Homo_sapiens 0 239
ENST00000574816 PAFAH1B1-010 processed_transcript Homo_sapiens 0 294
ENST00000604843 AC068491.3-002 processed_transcript Homo_sapiens 0 303
ENST00000609078 PAFAH1B1-014 processed_transcript Homo_sapiens 0 398
ENST00000610190 PAFAH1B1-013 retained_intron Homo_sapiens 9e-27 124

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