C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KAT8 regulatory NSL complex subunit 2, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181818 Kansl2-ps-001 ENSMUSG00000097530 10090 + 7:72672818-72674278 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000181818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000181818 2.893±0.09 1.998±0.75 0.629±0.28 2.871±0.83 1.511±0.43 0.531±0.10 1.099±0.24 0.771±0.26 0.982±0.52 0.931±0.16 0.276±0.09 3.156±1.63 0.372±0.16 0.586±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UC CIL_0008UC_0002 VISTA 7:72240417-72843228

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402173 RP1-253B10.2-001 processed_pseudogene Homo_sapiens 0 215
ENST00000420613 KANSL2-002 protein_coding Homo_sapiens 0 1812
ENST00000546701 KANSL2-003 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000547087 KANSL2-007 protein_coding Homo_sapiens 0 518
ENST00000547582 KANSL2-014 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000548147 KANSL2-004 nonsense_mediated_decay Homo_sapiens 0 763
ENST00000548254 KANSL2-012 retained_intron Homo_sapiens 0 316
ENST00000548304 KANSL2-011 protein_coding Homo_sapiens 0 259
ENST00000548701 KANSL2-013 processed_transcript Homo_sapiens 0 580
ENST00000549574 KANSL2-006 nonsense_mediated_decay Homo_sapiens 0 1194
ENST00000550347 KANSL2-001 protein_coding Homo_sapiens 0 1812
ENST00000550870 KANSL2-008 protein_coding Homo_sapiens 0 405
ENST00000550931 KANSL2-009 protein_coding Homo_sapiens 0 453
ENST00000553086 KANSL2-005 protein_coding Homo_sapiens 0 1471

Loading