C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008UC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1686 VISTA 9606 15:93681345-94283913
GeneTranscriptPositionBiotype
ENSG00000140563 (MCTP2)
multiple C2 domains, transmembrane 2 		ENST00000357742 (MCTP2-002) 94298266-94483952 protein_coding
ENST00000449432 (MCTP2-006) 94476380-94479583 processed_transcript
ENST00000451018 (MCTP2-009) 94298266-94479034 protein_coding
ENST00000456504 (MCTP2-004) 94231722-94480403 nonsense_mediated_decay
ENST00000543482 (MCTP2-001) 94231538-94358606 protein_coding
ENST00000556363 (MCTP2-005) 94231572-94344057 retained_intron
ENST00000557505 (MCTP2-008) 94399531-94402019 retained_intron
ENST00000557742 (MCTP2-003) 94355974-94403264 protein_coding
ENST00000561608 (MCTP2-010) 94231572-94314344 processed_transcript
ENSG00000258476 (RP11-76E17.3)
 ENST00000554530 (RP11-76E17.3-001) 93863109-93878356 lincRNA
ENST00000555281 (RP11-76E17.3-002) 93865576-93878356 lincRNA
ENST00000556030 (RP11-76E17.3-003) 93865507-93867715 lincRNA
ENSG00000258570 (RP11-452K20.1)
 ENST00000557753 (RP11-452K20.1-001) 94168349-94168751 processed_pseudogene
ENSG00000258631 (RP11-739G5.1)
 ENST00000554318 (RP11-739G5.1-001) 93589867-93760799 lincRNA
ENSG00000258632 (RP11-354B3.1)
 ENST00000556983 (RP11-354B3.1-001) 94273496-94274005 processed_pseudogene
ENSG00000258831 (RP11-76E17.4)
 ENST00000556763 (RP11-76E17.4-001) 93882082-93886743 lincRNA
ENSG00000258895 (CTD-2643K12.1)
 ENST00000555663 (CTD-2643K12.1-001) 94033658-94034177 processed_pseudogene
ENSG00000259123 (RP11-76E17.2)
 ENST00000553477 (RP11-76E17.2-001) 93837611-93852981 lincRNA
ENSG00000259724 (CTD-2643K12.3)
 ENST00000556357 (CTD-2643K12.3-002) 94082896-94099350 lincRNA
ENST00000558874 (CTD-2643K12.3-001) 93905405-94107938 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0008UC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1686 VISTA 10090 7:72240417-72843228
GeneTranscriptPositionBiotype
ENSMUSG00000032776 (Mctp2)
multiple C2 domains, transmembrane 2 		ENSMUST00000079323 (Mctp2-001) 72077830-72306595 protein_coding
ENSMUSG00000081895 (Rpl17-ps10)
ribosomal protein L17, pseudogene 10 		ENSMUST00000119383 (Rpl17-ps10-001) 72648757-72649311 processed_pseudogene
ENSMUSG00000097530 (Kansl2-ps)
KAT8 regulatory NSL complex subunit 2, pseudogene 		ENSMUST00000181818 (Kansl2-ps-001) 72672818-72674278 processed_pseudogene
ENSMUSG00000098195 (Gm7693)
predicted gene 7693 		ENSMUST00000183257 (Gm7693-001) 72712634-72713621 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UC_0001ENSG00000140563ENST00000357742ENST00000449432ENST00000451018ENST00000456504ENST00000543482ENST00000556363ENST00000557505ENST00000557742ENST00000561608ENSG00000258476ENST00000554530ENST00000555281ENST00000556030ENSG00000258570ENST00000557753ENSG00000258631ENST00000554318ENSG00000258632ENST00000556983ENSG00000258831ENST00000556763ENSG00000258895ENST00000555663ENSG00000259123ENST00000553477ENSG00000259724ENST00000556357ENST00000558874CIL_0008UC_0002ENSMUSG00000032776ENSMUST00000079323ENSMUSG00000081895ENSMUST00000119383ENSMUSG00000097530ENSMUST00000181818ENSMUSG00000098195ENSMUST00000183257
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UC_0001ENSG00000140563ENST00000357742ENST00000449432ENST00000451018ENST00000456504ENST00000543482ENST00000556363ENST00000557742ENSG00000258476ENST00000554530ENST00000555281ENST00000556030ENSG00000258570ENST00000557753ENSG00000258631ENST00000554318ENSG00000258632ENST00000556983ENSG00000258831ENST00000556763ENSG00000258895ENST00000555663ENSG00000259123ENST00000553477ENSG00000259724ENST00000556357ENST00000558874CIL_0008UC_0002ENSMUSG00000032776ENSMUST00000079323ENSMUSG00000081895ENSMUST00000119383ENSMUSG00000097530ENSMUST00000181818ENSMUSG00000098195ENSMUST00000183257
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140563 ENST00000357742 N/A 1.545±0.00 N/A N/A N/A 0.943±0.86 0.036±0.00 0.160±0.00 0.437±0.00 1.050±0.00 N/A 1.184±0.84 N/A 0.607±0.00
ENST00000449432 N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A 0.060±0.00 N/A N/A N/A
ENST00000451018 N/A N/A 1.204±0.00 0.164±0.06 1.552±1.33 N/A N/A N/A 0.089±0.00 3.343±0.00 N/A 2.977±0.00 N/A N/A
ENST00000456504 0.120±0.00 N/A N/A N/A N/A N/A 0.071±0.00 0.466±0.00 N/A 1.132±0.00 N/A 0.200±0.00 2.722±0.54 0.988±0.73
ENST00000543482 N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 N/A N/A 0.309±0.00 N/A N/A N/A
ENST00000556363 N/A N/A N/A N/A N/A N/A N/A N/A 0.691±0.68 2.869±0.00 N/A 1.852±0.00 N/A N/A
ENST00000557505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.445±0.00 N/A N/A
ENST00000561608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258476 ENST00000554530 0.047±0.00 N/A N/A N/A 0.193±0.00 N/A 0.093±0.00 0.017±0.00 N/A 0.036±0.00 N/A N/A 0.037±0.00 0.568±0.21
ENST00000555281 N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A 1.957±0.00 0.081±0.00 0.089±0.00 0.479±0.00
ENST00000556030 0.240±0.00 0.148±0.00 N/A 0.149±0.00 N/A 0.200±0.00 0.073±0.00 N/A 0.442±0.00 0.263±0.00 N/A 0.146±0.00 N/A 0.399±0.00
ENSG00000258570 ENST00000557753 N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258631 ENST00000554318 N/A N/A N/A 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258632 ENST00000556983 N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.084±0.00
ENSG00000258831 ENST00000556763 0.048±0.00 N/A N/A N/A 0.106±0.00 N/A N/A 0.035±0.00 0.021±0.00 N/A N/A N/A N/A 0.173±0.02
ENSG00000258895 ENST00000555663 0.049±0.00 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 0.150±0.00 N/A N/A
ENSG00000259123 ENST00000553477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.02
ENSG00000259724 ENST00000556357 N/A N/A N/A N/A N/A 0.285±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558874 N/A N/A N/A 0.011±0.00 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 0.086±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032776 ENSMUST00000079323 0.253±0.14 0.098±0.07 0.851±0.00 0.169±0.10 0.613±0.26 2.584±0.39 0.029±0.01 0.268±0.04 0.650±0.58 0.433±0.24 0.021±0.02 0.402±0.13 0.372±0.15 0.033±0.01
ENSMUSG00000081895 ENSMUST00000119383 0.743±0.19 0.437±0.29 2.913±2.69 4.590±0.36 0.781±0.37 1.633±1.35 0.876±0.40 1.321±0.89 9.392±7.52 0.532±0.39 0.320±0.13 1.347±0.78 0.175±0.12 0.806±0.71
ENSMUSG00000097530 ENSMUST00000181818 2.893±0.09 1.998±0.75 0.629±0.28 2.871±0.83 1.511±0.43 0.531±0.10 1.099±0.24 0.771±0.26 0.982±0.52 0.931±0.16 0.276±0.09 3.156±1.63 0.372±0.16 0.586±0.13
ENSMUSG00000098195 ENSMUST00000183257 N/A N/A N/A N/A 0.451±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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