C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosome production factor 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181995 Rpf2-005 ENSMUSG00000038510 10090 - 10:40223813-40247003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000181995
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000181995 1.018±0.40 8.134±0.00 0.691±0.16 0.478±0.02 0.830±0.18 0.841±0.17 1.248±0.33 1.467±0.21 3.734±4.93 19.382±14.92 8.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FT CIL_0002FT_0002 CGP 10:40033535-40247036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368864 RPF2-002 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000424137 RPF2P1-001 processed_pseudogene Homo_sapiens 0 719
ENST00000425871 RPF2-003 protein_coding Homo_sapiens 0 665
ENST00000441448 RPF2-001 protein_coding Homo_sapiens 0 804
ENST00000607388 RPF2-004 nonsense_mediated_decay Homo_sapiens 0 804

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