C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C motif) receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182350 Xcr1-001 ENSMUSG00000060509 10090 - 9:123852315-123862029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182350
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182350 0.511±0.27 0.167±0.06 0.331±0.05 0.042±0.01 2.441±0.40 0.271±0.07 0.121±0.03 0.346±0.07 0.097±0.09 1.076±0.18 0.050±0.03 0.604±0.28 0.043±0.04 0.101±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OL CIL_0003OL_0002 CGP 9:123806477-123862029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004950 IEA chemokine receptor activity
GO:0005886 IEA plasma membrane
GO:0006935 IDA chemotaxis
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0034097 IDA response to cytokine
GO:0051209 IDA release of sequestered calcium ion into cytosol
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309285 XCR1-001 protein_coding Homo_sapiens 0 573

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