C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172215-ENSG00000173578 CGP 9606 3:45940933-46027742
GeneTranscriptPositionBiotype
ENSG00000163820 (FYCO1)
FYVE and coiled-coil domain containing 1 		ENST00000296137 (FYCO1-001) 45917904-45995815 protein_coding
ENST00000433878 (FYCO1-003) 45917904-45958572 protein_coding
ENST00000438446 (FYCO1-006) 45921585-45958661 protein_coding
ENST00000471739 (FYCO1-005) 45984581-45995824 retained_intron
ENST00000535325 (FYCO1-201) 45917899-45995824 protein_coding
ENSG00000172215 (CXCR6)
chemokine (C-X-C motif) receptor 6 		ENST00000304552 (CXCR6-001) 45943472-45948353 protein_coding
ENST00000438735 (CXCR6-002) 45940933-45948337 protein_coding
ENST00000457814 (CXCR6-003) 45945049-45947510 protein_coding
ENST00000458629 (CXCR6-004) 45945019-45947823 protein_coding
ENSG00000173578 (XCR1)
chemokine (C motif) receptor 1 		ENST00000309285 (XCR1-001) 46017024-46027742 protein_coding
ENST00000395946 (XCR1-002) 46021840-46027487 protein_coding
ENSG00000226933 (NRBF2P2)
nuclear receptor binding factor 2 pseudogene 2 		ENST00000413087 (NRBF2P2-001) 46023296-46024156 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003OL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048521-ENSMUSG00000060509 CGP 10090 9:123806477-123862029
GeneTranscriptPositionBiotype
ENSMUSG00000025241 (Fyco1)
FYVE and coiled-coil domain containing 1 		ENSMUST00000084715 (Fyco1-001) 123789886-123851566 protein_coding
ENSMUST00000167595 (Fyco1-201) 123789510-123851899 protein_coding
ENSMUST00000183700 (Fyco1-003) 123838182-123851886 retained_intron
ENSMUST00000184082 (Fyco1-002) 123830013-123851881 protein_coding
ENSMUSG00000048521 (Cxcr6)
chemokine (C-X-C motif) receptor 6 		ENSMUST00000049810 (Cxcr6-201) 123806477-123811754 protein_coding
ENSMUSG00000060509 (Xcr1)
chemokine (C motif) receptor 1 		ENSMUST00000182350 (Xcr1-001) 123852315-123862029 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OL_0001ENSG00000163820ENST00000296137ENST00000433878ENST00000438446ENST00000471739ENST00000535325ENSG00000172215ENST00000304552ENST00000438735ENST00000457814ENST00000458629ENSG00000173578ENST00000309285ENST00000395946ENSG00000226933ENST00000413087CIL_0003OL_0002ENSMUSG00000025241ENSMUST00000084715ENSMUST00000167595ENSMUST00000183700ENSMUST00000184082ENSMUSG00000048521ENSMUST00000049810ENSMUSG00000060509ENSMUST00000182350
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OL_0001ENSG00000163820ENST00000296137ENST00000433878ENST00000535325ENSG00000172215ENST00000304552ENST00000438735ENST00000457814ENST00000458629ENSG00000173578ENST00000309285ENST00000395946ENSG00000226933ENST00000413087CIL_0003OL_0002ENSMUSG00000025241ENSMUST00000084715ENSMUST00000167595ENSMUSG00000048521ENSMUST00000049810ENSMUSG00000060509ENSMUST00000182350
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163820 ENST00000296137 10.545±0.00 6.533±0.00 0.891±0.00 1.121±0.78 5.607±2.23 8.076±6.89 20.883±17.40 3.485±0.00 2.840±1.20 3.422±2.17 17.544±7.17 5.993±5.59 2.096±0.09 3.163±2.38
ENST00000433878 N/A 5.478±0.00 N/A 0.108±0.00 5.282±0.00 11.168±0.00 14.411±0.00 2.437±0.00 1.021±0.00 5.062±0.00 7.508±2.24 4.327±2.16 1.366±0.03 0.553±0.00
ENST00000438446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535325 N/A N/A N/A N/A N/A N/A N/A 0.912±0.00 2.021±0.00 N/A 1.928±0.00 N/A N/A N/A
ENSG00000172215 ENST00000304552 N/A 2.337±0.00 N/A N/A 0.857±0.68 0.225±0.00 0.154±0.06 0.444±0.11 0.724±0.05 1.933±0.00 0.792±0.00 0.780±0.17 1.960±0.46 0.076±0.03
ENST00000438735 0.037±0.00 N/A N/A 0.142±0.11 0.638±0.00 N/A N/A N/A N/A N/A 0.653±0.63 0.262±0.02 3.450±1.12 N/A
ENST00000457814 0.147±0.00 N/A 0.850±0.00 N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458629 0.034±0.00 N/A 0.377±0.00 0.088±0.07 0.338±0.30 0.279±0.25 0.261±0.12 0.236±0.00 0.861±0.00 0.561±0.33 0.184±0.14 0.425±0.00 N/A N/A
ENSG00000173578 ENST00000309285 0.029±0.00 0.199±0.00 0.013±0.00 0.038±0.00 0.129±0.03 0.010±0.00 0.054±0.00 0.050±0.00 0.134±0.10 0.196±0.02 0.012±0.00 0.096±0.05 2.757±1.57 0.015±0.00
ENST00000395946 N/A N/A N/A 0.138±0.00 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226933 ENST00000413087 N/A 0.018±0.00 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A 0.074±0.00 0.315±0.00 1.994±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025241 ENSMUST00000084715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.314±0.00 1.588±0.00 5.487±0.00
ENSMUST00000167595 6.001±1.42 6.438±1.78 7.252±1.66 2.980±1.30 5.502±2.12 3.977±0.43 17.345±8.25 4.628±0.53 3.140±1.14 7.821±0.76 31.341±3.19 5.446±2.74 3.104±1.39 10.710±2.51
ENSMUST00000183700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048521 ENSMUST00000049810 0.860±0.29 0.326±0.05 0.595±0.10 0.060±0.00 4.136±0.95 0.665±0.38 0.225±0.06 0.572±0.21 0.310±0.29 1.252±0.33 0.067±0.09 0.627±0.20 0.246±0.14 0.155±0.06
ENSMUSG00000060509 ENSMUST00000182350 0.511±0.27 0.167±0.06 0.331±0.05 0.042±0.01 2.441±0.40 0.271±0.07 0.121±0.03 0.346±0.07 0.097±0.09 1.076±0.18 0.050±0.03 0.604±0.28 0.043±0.04 0.101±0.04

Loading