C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7545
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182773 Gm7545-001 ENSMUSG00000098175 10090 + 6:86284887-86285894 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverOvaryPlacentaENSMUST00000182773
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Ovary Placenta
ENSMUST00000182773 0.030±0.00 0.062±0.00 0.041±0.00 0.060±0.02 0.029±0.00 0.067±0.00 0.012±0.00 0.325±0.05 0.028±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1038
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 784
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1022
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1038
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1038
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 470
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 619
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 573
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 342
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 1e-18 99
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 784
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 784
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 728
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 804
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 490
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 920

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